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Top Forums Shell Programming and Scripting awk to format each line by pattern Post 303018772 by Scrutinizer on Thursday 14th of June 2018 05:16:40 PM
Old 06-14-2018
Try:
Code:
awk '
  {
    split($4,F,/_/)
    if(split(F[3],G,/[)(]/)) {
      if(G[2]~/[[:alpha:]]/)
        p=G[2]
      else 
        p=G[1]
    } 
    else 
      p=F[3]
  }
  {
    print "chr" $1, $2, $3, "chr" $1 ":" $2 "-" $3 OFS p
  }
' FS='\t' OFS='\t' file

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GREP(1) 						      General Commands Manual							   GREP(1)

NAME
grep - search a file for a pattern SYNOPSIS
grep [ option ... ] pattern [ file ... ] DESCRIPTION
Grep searches the input files (standard input default) for lines (with newlines excluded) that match the pattern, a regular expression as defined in regexp(6). Normally, each line matching the pattern is `selected', and each selected line is copied to the standard output. The options are -c Print only a count of matching lines. -h Do not print file name tags (headers) with output lines. -i Ignore alphabetic case distinctions. The implementation folds into lower case all letters in the pattern and input before interpre- tation. Matched lines are printed in their original form. -l (ell) Print the names of files with selected lines; don't print the lines. -L Print the names of files with no selected lines; the converse of -l. -n Mark each printed line with its line number counted in its file. -s Produce no output, but return status. -v Reverse: print lines that do not match the pattern. Output lines are tagged by file name when there is more than one input file. (To force this tagging, include /dev/null as a file name argument.) Care should be taken when using the shell metacharacters $*[^|()= and newline in pattern; it is safest to enclose the entire expression in single quotes '...'. SOURCE
/sys/src/cmd/grep.c SEE ALSO
ed(1), awk(1), sed(1), sam(1), regexp(6) DIAGNOSTICS
Exit status is null if any lines are selected, or non-null when no lines are selected or an error occurs. GREP(1)
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