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Top Forums Shell Programming and Scripting Sum elements of 2 arrays excluding labels Post 303014972 by Geneanalyst on Saturday 24th of March 2018 08:49:11 PM
Old 03-24-2018
Question Sum elements of 2 arrays excluding labels

I'm looking for an efficient way to sum elements from 2 arrays using AWK and preserve header as well as sample names in the output array. I have Ubuntu 16.04 LTS. For example;

ARRAY 1

Code:
SAMPLE    DERIVED    ANCESTRAL
Sample1    14352    0
Sample2    14352    0
Sample3    14352    0
Sample4    9880    4472
Sample5    9786    4566
Sample6    9846    4506
Sample7    9787    4565
Sample8    9800    4552
Sample9    9764    4588
Sample10    9760    4592
Sample11    9691    4661
Sample12    9798    4554
Sample13    9740    4612


ARRAY 2:

Code:
SAMPLE    DERIVED    ANCESTRAL
Sample1    14352    0
Sample2    14352    0
Sample3    14352    0
Sample4    13674    678
Sample5    13749    603
Sample6    13701    651
Sample7    13682    670
Sample8    13677    675
Sample9    13684    668
Sample10    13674    678
Sample11    13642    710
Sample12    13679    673
Sample13    13713    639


DESIRED OUTPUT ARRAY:
Code:
SAMPLE    TOTAL DERIVED    TOTAL ANCESTRAL
Sample1    28704    0
Sample2    28704    0
Sample3    28704    0
Sample4    23554    5150
Sample5    23535    5169
Sample6    23547    5157
Sample7    23469    5235
Sample8    23477    5227
Sample9    23448    5256
Sample10    23434    5270
Sample11    23333    5371
Sample12    23477    5227
Sample13    23453    5251

 

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Sum(3pm)						  LogReport's Lire Documentation						  Sum(3pm)

NAME
Lire::Sum - Lire class that implements the sum operator SYNOPSIS
use Lire::Sum DESCRIPTION
Class that implements the sum operator. This operator will compute the field's sum in a group of DLF records. It's possible to compute a weighted sum in which each value is first multiplied by the value of another DLF field. Its also possible to express the count as a ratio of the total count for the group or table. METHODS
new( %params ) Creates a new Lire::Count object. In addition to the values supported by its parents, the weight and ratio attributes will be initialized to the values specified in the %params argument. weight( [$new_weight] ) Returns the DLF field's name by which the values will be multiplied before being summed. You can change the weight field by specifying a new name as the $new_weight parameter. Use undef to remove the use of a weighting field. ratio([$new_ratio]) Returns how the sum will be expressed. This can one of three possible values: none Default. The absolute sum will be used. group The sum will be expressed as a percentage of the group's sum. table The sum will be expressed as a percentage of the table's total sum. SEE ALSO
zLire::ReportSpec(3pm), Lire::ReportOperator(3pm), Lire::Aggregator(3pm), Lire::Aggregate(3pm). AUTHOR
Francis J. Lacoste <flacoste@logreport.org> VERSION
$Id: Sum.pm,v 1.17 2008/03/09 19:27:31 vanbaal Exp $ COPYRIGHT
Copyright (C) 2001, 2002 Stichting LogReport Foundation LogReport@LogReport.org This file is part of Lire. Lire is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program (see COPYING); if not, check with http://www.gnu.org/copyleft/gpl.html. Lire 2.1.1 2008-03-09 Sum(3pm)
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