The awk below executes and update the desired field in my first awk. However, the white space between nonsynonymous SNV in $9 is being split into tabs and my attempt to correct this does not update the field
unless it is removed. I am not sure what I am doing wrong? Thank you .
file1
file2
current output
desired output field in bold updated and not split
awk
To ignore the whitespace I tried:
Hai
I am using
bash-2.03$ bash --version
GNU bash, version 2.03.0(1)-release (sparc-sun-solaris)
I am not able to use gawk command its showing command not found , why ?
Eg:
awk 'NR==1' fix.txt | gawk 'BEGIN { FIELDWIDTHS = "3 2" } { printf($1"|"$2); }'... (8 Replies)
Unix gurus,
I have a file as below, which is basically the result set obtained from a sql query on an Oracle database.
ID PROG_NAME USER_PROG_NAME
-------- --------------- ----------------------------------------
33045 INCOIN Import Items
42690 ... (3 Replies)
Hi
Following is an example line.
echo "192.22.22.22 \"33dffwef\" 200 300 dsdsd" | sed "s:\(\ *\ \):\1:"
I want it's output to be
200
However this is not the case. Can you tell me how to do it? I don't want to use AWK for this. Secondly, how can i fetch just 300? Should I use "\2"... (3 Replies)
Hi, all
I need to get fields in a line that are separated by commas, some of the fields are enclosed with double quotes, and they are supposed to be treated as a single field even if there are commas inside the quotes.
sample input:
for this line, 5 fields are supposed to be extracted, they... (8 Replies)
Given a file:
# configuration file for newsyslog
# $FreeBSD: /repoman/r/ncvs/src/etc/newsyslog.conf,v 1.50 2005/03/02 00:40:55 brooks Exp $
#
# Entries which do not specify the '/pid_file' field will cause the
# syslogd process to be signalled when that log file is rotated. This
# action... (10 Replies)
Hi again
I have an xml file and want to remove the leading white space as it causes me issues later in my script
I see sed is possible but cant seem to get it to work
I tried
sed 's/^ *//' file.xml
output
<xn:VsDataContainer id="1U104799" modifier="update">
... (10 Replies)
Hi experts,
I have a very long file that looks about like this.
aaad_1577 64000
aaad_1577 72000
aaad_1577 72000
aaad_1577 65000
aaad_1577 65000
(...aaad about a thousand times...)
bbbd_2002 56000
bbbd_2002 57000
bbbd_3045 57000
cccd_3452 150000
dddd_6014 150000
dddd_6014 150000... (2 Replies)
Is there a reliable way to deal with whitespace in array indicies?
I am trying to annotate fails in a database using a table of known fails.
In a begin block I have code like this:
# Read in Known Fail List
getline < "'"$failListFile"'"; getline < "'"$failListFile"'"; getline <... (6 Replies)
We have a csv file as mentioned below and the requirement is to change the date format in file as mentioned below.
Current file (file.csv)
----------------------
empname,date_of_join,dept,date_of_resignation
ram,08/09/2015,sales,21/06/2016
"akash,sahu",08/10/2015,IT,21/07/2016
... (6 Replies)
Hello is it possible with awk or sed to replace any white space with the previous line characters in the same position?
I am asking this because the file I have doesn't always follow a pattern.
For example the file I have is the result of a command to obtain windows ACLs:
icacls C:\ /t... (5 Replies)