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Full Discussion: awk to print line based on two keywords
Top Forums Shell Programming and Scripting awk to print line based on two keywords Post 302997217 by Aia on Tuesday 9th of May 2017 11:56:08 PM
Old 05-10-2017
Quote:
Originally Posted by cmccabe
[...]
desired output
Code:
SVTYPE=Fusion;READ_COUNT=1868;GENE_NAME=ETV6;EXON_NUM=4;RPM=1.5825e-09;NORM_COUNT=0.001582480886121524;ANNOTATION=COSF823;FUNC=[{'gene':'ETV6','exon':'4','oncomineGeneClass':'Gain-of-Function','oncomineVariantClass':'Fusion'}]     GT:GQ    ./.:.
chr15    88483984    ETV6-NTRK3.E4N15.COSF823.1_2    T    ]chr12:12006495]T    .    PASS

Your desired output is comprised of two different records, therefore it cannot be handled by the logic you are using.

Unfortunately, your one sample introduces ambiguity which makes it hard to guess for a possible alternative.
This User Gave Thanks to Aia For This Post:
cmccabe
 

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LEARN ABOUT NETBSD

mpii

MPII(4) 						   BSD Kernel Interfaces Manual 						   MPII(4)

NAME

     mpii -- LSI Logic Fusion-MPT Message Passing Interface II

SYNOPSIS

     mpii* at pci? dev ? function ?

DESCRIPTION

     The mpii driver provides support for storage controllers using the LSI Logic Fusion-MPT Message Passing Interface II family of chipsets:

	   -   LSISAS2004, LSISAS2008

     These chipsets can be found on the following controllers:

	   -   Dell PERC H200
	   -   LSI SAS 9200-8e, SAS 9211-4i, SAS 9211-8i

     Some models of these controllers have varying degrees of support for RAID 0 and RAID 1.

     mpii supports monitoring of the logical disks in the controller through the bioctl(8) and envstat(8) commands.

EVENTS

     The mpii driver is able to send events to powerd(8) if a logical drive in the controller is not online.  The state-changed event will be sent
     to the /etc/powerd/scripts/sensor_drive script when such condition happens.

SEE ALSO

     intro(4), pci(4), scsi(4), sd(4), bioctl(8), envstat(8), powerd(8)

HISTORY

     The mpii driver first appeared in OpenBSD 4.7.

AUTHORS

     The mpii driver was written by James Giannoules and Mike Belopuhov.

BUGS

     The chips supported by mpii do not use a SCSI-like identifier.  Instead they use an opaque ID and leave discovery order up to the operating
     system.  The code to handle this is currently not implemented and therefore it is not a good idea to run this driver on a multi-boot machine
     or with more than 1 drive.

BSD
								  April 19, 2012							       BSD
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