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Top Forums Shell Programming and Scripting Perl to run different parser based on digit Post 302993236 by Aia on Tuesday 7th of March 2017 10:14:19 PM
Old 03-07-2017
Code:
perl -nle 'BEGIN{$,="\t"}/del([A-Z]{2})ins([A-Z]{2})\s+NC_0+(\w+)\.\d+:\w\.(\d+)_(\d+)/ and print $3,$4,$5,$1,$2' out_position.txt > out2.txt

Code:
cat out2.txt
14      41747805        41747806        GC      AA


Last edited by Aia; 03-07-2017 at 11:38 PM..
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CheckDigits::MXX_002(3pm)				User Contributed Perl Documentation				 CheckDigits::MXX_002(3pm)

NAME
CheckDigits::MXX_002 - compute check digits for CAS SYNOPSIS
use Algorithm::CheckDigits; $cas = CheckDigits('cas'); if ($cas->is_valid('1333-74-0')) { # do something } $cn = $cas->complete('1333-74-'); # $cn = '1333-74-0' $cd = $cas->checkdigit('1333-74-0'); # $cd = '0' $bn = $cas->basenumber('1333-74-0'); # $bn = '1333-74-' DESCRIPTION
ALGORITHM 1. Beginning right with the second digit all digits are weighted ascending starting with 1. 2. The sum of those products is computed. 3. The checksum is the last digit of the sum from step 2 (modulo 10). METHODS is_valid($number) Returns true only if $number consists solely of numbers and the last digit is a valid check digit according to the algorithm given above. Returns false otherwise, complete($number) The check digit for $number is computed and concatenated to the end of $number. Returns the complete number with check digit or '' if $number does not consist solely of digits and spaces. basenumber($number) Returns the basenumber of $number if $number has a valid check digit. Return '' otherwise. checkdigit($number) Returns the checkdigit of $number if $number has a valid check digit. Return '' otherwise. EXPORT None by default. AUTHOR
Mathias Weidner, <mathias@weidner.in-bad-schmiedeberg.de> THANKS
Aaron W. West pointed me to a fault in the computing of the check digit. HERMIER Christophe made me aware that CAS is now assigning 10-digit CAS Registry Numbers (http://www.cas.org/newsevents/10digitrn.html) SEE ALSO
perl, CheckDigits, www.pruefziffernberechnung.de, www.cas.org http://www.cas.org/expertise/cascontent/registry/checkdig.html perl v5.10.0 2008-05-17 CheckDigits::MXX_002(3pm)
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