Can somebody explain why my sed command is not working.
I do the folloinwg:
Generates a binary file to /tmp/x1.out
/usr/lib/sa/sa2 -s 4:00 -e 8:00 -i 3600 -A -o /tmp/x1.out
decodes the file (no problem so far)
sar -f /tmp/x1.out
When I do this it does not appear to delete the... (4 Replies)
:confused:Hi All,
I need help on removing lines in a text file.
Sample file :
When there is a match ip for IPAddress in my `cat ip.out`, proceed delete line above until string "Comp" is found.
Thank you very much.
---------- Post updated at 12:56 AM ---------- Previous update was... (4 Replies)
Hi,
I have a file with values,
file1:
BELL-1180-1180-81|577:1017|
BELL-1180-1180-81|jm10i-auto-stub1/577:102|
BELL-1180-1180-81|jm10i-auto-stub1/577:101|
BELL-1180-1180-81|jm10i-auto-stub1/577:1700|
BELL-1180-1180-81|jm10i-auto-stub1/577:1699|
I need to remove the lines which has... (9 Replies)
Hi
I am having some issue editing a file in sed.
What I want to do is, in a loop pass a variable to a sed command. Sed should then search a file for a line that matches that variable, then remove all lines below until it reaches a line starting with a constant.
I have managed to write a... (14 Replies)
Gents,
I would like to remove some lines from a big file ( file2).
The objetive is to remove all the lines in file2 containing a certain string which are in file data2delete..
file data2delete contens:
2573.0 7260.01
2893.0 7255.01
2903.0 7245.01
2897.0 7255.01
2561.0 7255.01... (6 Replies)
Hi I have the following kind of line sin my file .
print ' this is first'.
print ' this is firs and next '
' line continuous '. -- this is entire print line.
print ' this is first and next '
' line continuous and'
'still there now over'. -- this 3lines together a single print line.
... (5 Replies)
Hi,
I am new to unix and i started some scripting recently. Please go through the following script i wrote.
#!/bin/sh
file='path../tfile'
file1='path../tfile1'
rmfile='path../test2'
C1=1
C2=1
exec 3< $file1
while read LINE1; do
read LINE2 <&3
a=$LINE1
b=`expr $LINE2 - 1`
... (1 Reply)
I've tried numerous commands, but I am not sure how to use sed in a loop. This is what I have:
VARZ contains CARD_FILE_LIST and it also contains CARD_FILE_LIST2
so
echo "$VARZ"
CARD_FILE_LIST
CARD_FILE_LIST2
I have a file with 60 lines in /tmp/testfile it and I want those lines deleted... (3 Replies)
Hello,
My goal is the make all x times repeated lines into a single line.
I need to attain the expected output with sed -i , I need to overwrite the MyFile
MyFile:
Hello World
Welcome
Hello World
Welcome Back
This is my test
Expected output:
Hello World
Welcome
Welcome Back
This is... (6 Replies)
Discussion started by: baris35
6 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)