Hi experts,
I have file which looks like :
I have been trying to segregate the column 9 according minimum and maximum values. Minimum is from 0 to 500 and maximum from 500 to 1000. I wrote an awk script
.
But it does not work.
Can someone help.
Regards.
Moderator's Comments:
Please use code tags as required by forum rules!
Last edited by RudiC; 05-31-2016 at 07:38 AM..
Reason: Added / corrected (I)CODE tags.
Hi guys
I have a shell script that executes sql statemets and sends the output to a file.the script takes in parameters executes sql and sends the result to an output file.
#!/bin/sh
echo " $2 $3 $4 $5 $6 $7
isql -w400 -U$2 -S$5 -P$3 << xxx
use $4
go
print"**Changes to the table... (0 Replies)
Hello,
I have this awk script that I want to execute by passing parameters through a shell script.
I'm a little confused. This awk script removes duplicates from an input file.
Ok, so I have a .sh file called rem_dups.sh
#!/usr/bin/sh... (4 Replies)
hi everyone
i am trying to do this
bash> cat abc.sh
deepak()
{
echo Deepak
}
deepak
bash>./abc.sh
Deepak
so it is giving me write simply i created a func and it worked
now i modified it like this way
bash> cat abc.sh (2 Replies)
This is the final first release of the dynamic menu generator for pekwm (WM).
#!/bin/bash
function param_val {
awk "/^${1}=/{gsub(/^${1}="'/,""); print; exit}' $2
}
echo "Dynamic {"
for CF in `ls -c1 /usr/share/applications/*.desktop`
do
name=$(param_val Name $CF)
... (3 Replies)
I am getting the following error while passing parameter to a shell script called within awk script. Any idea what's causing this issue and how to ix it ? Thanks
sh: -c: line 0: syntax error near unexpected token `newline'
sh: -c: line 0: `./billdatecalc.sh ... (10 Replies)
Discussion started by: Sudhakar333
10 Replies
7. Post Here to Contact Site Administrators and Moderators
Variable I have in my shell script
diff=$1$2.diff
id=$2
new=new_$diff
echo "My id is $1"
echo "I want to sync for user account $id"
##awk command I am using is as below
cat $diff | awk -F'~' ''$2 == "$id"' {print $0}' > $new
I could see value of $id is not passing to the awk... (0 Replies)
I have a shell script (.sh) and I want to pass a parameter value to the awk command but I am getting exception, please assist.
diff=$1$2.diff
id=$2 new=new_$diff
echo "My id is $1"
echo "I want to sync for user account $id"
##awk command I am using is as below
cat $diff |... (1 Reply)
Hi
I have a text file (Input.txt) with two column entries separated by tab as given below:
aaa str1
bbb str2
cccccc str3
dddd str4
eee str3
ssss str2
sdf str3
hhh str1
fff str2
ccc str3
.....
.....
..... (1 Reply)
I'm trying to create a shell script that takes a awk script that I wrote and a filename as an argument. I was able to get that done but I'm having trouble figuring out how to keep the header of the output at the top but sort the rest of the rows alphabetically. This is what I have now but it is... (1 Reply)
Discussion started by: Eric7giants
1 Replies
LEARN ABOUT DEBIAN
bio::treeio::svggraph
Bio::TreeIO::svggraph(3pm) User Contributed Perl Documentation Bio::TreeIO::svggraph(3pm)NAME
Bio::TreeIO::svggraph - A simple output format that converts a Tree object to an SVG output
SYNOPSIS
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'svggraph');
while( my $tree = $in->next_tree ) {
my $svg_xml = $out->write_tree($tree);
}
DESCRIPTION
This outputs a tree as an SVG graphic using the SVG::Graph API
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Brian OConnor
Email brian.oconnor-at-excite.com
CONTRIBUTORS
Allen Day Guillaume Rousse, Guillaume-dot-Rousse-at-inria-dot-fr
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::TreeIO::svggraph->new();
Function: Builds a new Bio::TreeIO::svggraph object
Returns : Bio::TreeIO::svggraph
Args :-width => image width (default 1600)
-height => image height (default 1000)
-margin => margin (default 30)
-stroke => stroke color (default 'black')
-stroke_width=> stroke width (default 2)
-font_size=> font size (default '10px')
-nomalize => undef or 'log' (default is undef)
write_tree
Title : write_tree
Usage : $treeio->write_tree($tree);
Function: Write a tree out to data stream in newick/phylip format
Returns : none
Args : Bio::Tree::TreeI object
decorateRoot
Title : _decorateRoot
Usage : internal methods
Function:
Example :
Returns :
Args :
next_tree
Title : next_tree
Usage :
Function: Sorry not possible with this format
Returns : none
Args : none
perl v5.14.2 2012-03-02 Bio::TreeIO::svggraph(3pm)