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Top Forums Shell Programming and Scripting Merge row based on replicates ID Post 302973787 by MadeInGermany on Saturday 21st of May 2016 02:15:21 PM
Old 05-21-2016
Don, Guiliano means there are not more than two lines with the same ID in column1.
And otherwise rdrtx1 solution would even handle it well.
--
In case the duplicate IDs are in adjacent lines, the following saves some memory
Code:
awk '
function printP(){ o=P[1]; for (i=2; i<=NF; i++) o=(o FS P[i]); print o }
function updateP(){ for (i=2; i<=NF; i++) if (P[i]=="NA") P[i]=$i }
NR>1 {
  if ($1==P[1]) {
    updateP()
    next
  }
  printP()
}
{ split ($0,P) }
END { printP() }
' infile

 

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UNIQ(1) 						      General Commands Manual							   UNIQ(1)

NAME
uniq - report repeated lines in a file SYNOPSIS
uniq [ -udc [ +n ] [ -n ] ] [ input [ output ] ] DESCRIPTION
Uniq reads the input file comparing adjacent lines. In the normal case, the second and succeeding copies of repeated lines are removed; the remainder is written on the output file. Note that repeated lines must be adjacent in order to be found; see sort(1). If the -u flag is used, just the lines that are not repeated in the original file are output. The -d option specifies that one copy of just the repeated lines is to be written. The normal mode output is the union of the -u and -d mode outputs. The -c option supersedes -u and -d and generates an output report in default style but with each line preceded by a count of the number of times it occurred. The n arguments specify skipping an initial portion of each line in the comparison: -n The first n fields together with any blanks before each are ignored. A field is defined as a string of non-space, non-tab charac- ters separated by tabs and spaces from its neighbors. +n The first n characters are ignored. Fields are skipped before characters. SEE ALSO
sort(1), comm(1) 7th Edition April 29, 1985 UNIQ(1)
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