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Top Forums Shell Programming and Scripting Merge row based on replicates ID Post 302973691 by giuliangiuseppe on Friday 20th of May 2016 06:51:23 AM
Old 05-20-2016
Merge row based on replicates ID

Dear All,
I was wondering if you may help me with an issue.
I would like to merge row based on column 1.

input file:
Code:
b1 ggg b2 fff NA NA hhh NA NA NA NA NA
a1 xxx a2 yyy NA NA zzz NA NA NA NA NA
a1 xxx NA NA a3 ttt NA ggg NA NA NA NA

output file:
Code:
b1 ggg b2 fff NA NA hhh NA NA NA NA NA
a1 xxx a2 yyy a3 ttt zzz ggg NA NA NA NA

well, basically if column 1 has the same ID (and there aren't more that two equal replicate ID) I would like to replace the NA value of first replicate row with the value (in the same column) of second replicate.
If both are NA or other same values leave as it is. Just replace the NA value with Not NA value in the same column withint replicates (column 1).

Well I think that the explanation is bad but the example should be clear I guess.

Let me know please if you need futher details

Thank you as always for your help.

Giuliano
 

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set_color(1)							       fish							      set_color(1)

NAME
set_color - set_color - set the terminal color set_color - set the terminal color Synopsis set_color [-v --version] [-h --help] [-b --background COLOR] [COLOR] Description Change the foreground and/or background color of the terminal. COLOR is one of black, red, green, brown, yellow, blue, magenta, purple, cyan, white and normal. o -b, --background Set the background color o -c, --print-colors Prints a list of all valid color names o -h, --help Display help message and exit o -o, --bold Set bold or extra bright mode o -u, --underline Set underlined mode o -v, --version Display version and exit Calling set_color normal will set the terminal color to whatever is the default color of the terminal. Some terminals use the --bold escape sequence to switch to a brighter color set. On such terminals, set_color white will result in a grey font color, while set_color --bold white will result in a white font color. Not all terminal emulators support all these features. This is not a bug in set_color but a missing feature in the terminal emulator. set_color uses the terminfo database to look up how to change terminal colors on whatever terminal is in use. Some systems have old and incomplete terminfo databases, and may lack color information for terminals that support it. Download and install the latest version of ncurses and recompile fish against it in order to fix this issue. Version 1.23.1 Sun Jan 8 2012 set_color(1)
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