I have a file (sorted_unknown) with ~1400 $5 values before the - that are "unknown". What I am trying to do is use the text in $2 of (sort_targets) to update those "unknown" values in the (sorted_unknown).
In $1 of (sort_targets) there are a set of numbers that can be used to update the "unknown" if it is in the range of the specific$4 of (sorted_unknown). The awk below does run but it does not produce the correct output (seems to be matching the ranges incorrectly). When I use the actual files (sort_targets and sorted_unknown) the first line in the output should be SEMA4G and it is SFTPA2 as of now Thank you .
example:
sort_targets
sorted_unknown
Desired output (unknown updated to TUBB3 because the TUBB3 because the $4 value in sorted_unown is within the range of $1 value in sort_targets).
awk
I am trying to match $1 in file1 with $2 in file2. If a match is found then $3 and $4 of file2 are copied to file1. Both files are tab-delimeted and I am getting a syntax error and would also like to update file1 in-place without creating a new file, but am not sure how. Thank you :).
file1
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