Sponsored Content
Full Discussion: Collapsing similar strings
Top Forums UNIX for Dummies Questions & Answers Collapsing similar strings Post 302962903 by Xterra on Sunday 20th of December 2015 09:36:56 PM
Old 12-20-2015
Rudi
Awesome! Would you mind explain it the code a bit?
Thanks

---------- Post updated at 09:36 PM ---------- Previous update was at 05:32 PM ----------

After testing the script, I came to realized that it does not do exactly what I need. Using the following infile (slight variation from my initial file):
Code:
BC00001 GA      2       2       3       3       2       5       1       5       3       3       2       4
BC00002 CA      2       2       3       3       2       5       1       5       3       3       2       4
BC00003 TX      2       2       3       3       2       5       1       5       3       3       2       4
BC00004 TX      2       2       4       3       2       6       2       2       3       4       3       2
BC00005 NC      2       2       4       3       2       6       2       2       3       4       3       2
BC00006 TX      3       3       3       3       2       5       1       5       3       2       2       2
BC00007 TX      2       2       3       3       2       5       1       5       4       3       2       4
BC00008 TX      3       3       3       3       2       5       1       5       3       2       2       4
BC00009 NY      3       2       3       3       2       5       1       3       3       3       2       3
BC00010 NY      1       2       3       3       2       5       1       6       4       3       3       3
BC00011 CA      2       2       3       3       2       5       1       5       3       3       2       4

This is what I get with Rudi's script:
Code:
BC00010 1       2       3       3       2       5       1       6       4       3       3       3  NY
BC00006 3       3       3       3       2       5       1       5       3       2       2       2  TX
BC00008 3       3       3       3       2       5       1       5       3       2       2       4  TX
BC00007 2       2       3       3       2       5       1       5       4       3       2       4  TX
BC00005 2       2       4       3       2       6       2       2       3       4       3       2  TX(1),NC(1)-Freq-2
BC00011 2       2       3       3       2       5       1       5       3       3       2       4  GA(1),CA(2),TX(1),CA(2)-Freq-4
BC00009 3       2       3       3       2       5       1       3       3       3       2       3  NY

However, this is what I need:
Code:
BC00010 1       2       3       3       2       5       1       6       4       3       3       3  NY
BC00006 3       3       3       3       2       5       1       5       3       2       2       2  TX
BC00008 3       3       3       3       2       5       1       5       3       2       2       4  TX
BC00007 2       2       3       3       2       5       1       5       4       3       2       4  TX
BC00005 2       2       4       3       2       6       2       2       3       4       3       2  TX(1),NC(1)-Freq-2
BC00011 2       2       3       3       2       5       1       5       3       3       2       4  GA(1),CA(2),TX(1)-Freq-4
BC00009 3       2       3       3       2       5       1       3       3       3       2       3  NY

As you can see, the cumulative number for CA is correct, but repeated
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

How to concatenate two strings or several strings into one string in B-shell?

like connect "summer" and "winter" to "summerwinter"? Can anybody help me? thanks a lot. (2 Replies)
Discussion started by: fontana
2 Replies

2. UNIX for Dummies Questions & Answers

Delete strings in file1 based on the list of strings in file2

Hello guys, should be a very easy questn for you: I need to delete strings in file1 based on the list of strings in file2. like file2: word1_word2_ word3_word5_ word3_word4_ word6_word7_ file1: word1_word2_otherwords..,word3_word5_others... (7 Replies)
Discussion started by: roussine
7 Replies

3. Shell Programming and Scripting

Collapsing and counting by key column in a sorted file

Hi I have a tab separated file with reads mappings of more than 2 million reads> the file is sorted by ID and looks like the following: SeqID Seq FreqSeq PosSeq HWI-EA332_0036:5:100:10131:16361#ATGC/1 GACTTGAGGTCTCCCCCGCA 1 TZRTMR_40497:317:+... (4 Replies)
Discussion started by: ramouz87
4 Replies

4. Shell Programming and Scripting

Delete lines in file containing duplicate strings, keeping longer strings

The question is not as simple as the title... I have a file, it looks like this <string name="string1">RZ-LED</string> <string name="string2">2.0</string> <string name="string2">Version 2.0</string> <string name="string3">BP</string> I would like to check for duplicate entries of... (11 Replies)
Discussion started by: raidzero
11 Replies

5. Shell Programming and Scripting

awk to search similar strings and add their values

Hi, I have a text file with the following content: monday,20 tuesday,10 wednesday,29 monday,10 friday,12 wednesday,14 monday,15 thursday,34 i want the following output: monday,45 tuesday,10 wednesday,43 friday,12 (3 Replies)
Discussion started by: prashu_g
3 Replies

6. Shell Programming and Scripting

awk to search similar strings and arrange in a specified pattern

Hi, I'm running a DB query which returns names of people and writes it in a text file as shown below: Carey, Jim; Cena, John Cena, John Sen, Tim; Burt, Terrence Lock, Jessey; Carey, Jim Norris, Chuck; Lee, Bruce Rock, Dwayne; Lee, Bruce I want to use awk and get all the names... (9 Replies)
Discussion started by: prashu_g
9 Replies

7. UNIX for Dummies Questions & Answers

Finding similar strings between two files

Hi, I have a file1 like this: ABAT ABCA1 ABCC1 ABCC5 ABCC8 ABCE1 ABHD2 ABL1 CAMTA1 ACBD3 ACCN1 And I have a second file like this: chr19 46118590 46119564 MACS_peak_1499 3100.00 chr19 46122009 46148405 CYP2B7P1 -2445 chr1 7430312 7430990... (7 Replies)
Discussion started by: a_bahreini
7 Replies

8. UNIX for Dummies Questions & Answers

Issue when using egrep to extract strings (too many strings)

Dear all, I have a data like below (n of rows=400,000) and I want to extract the rows with certain strings. I use code below. It works if there is not too many strings for example n of strings <5000. while I have 90,000 strings to extract. If I use the egrep code below, I will get error: ... (3 Replies)
Discussion started by: forevertl
3 Replies

9. UNIX for Beginners Questions & Answers

How to pass strings from a list of strings from another file and create multiple files?

Hello Everyone , Iam a newbie to shell programming and iam reaching out if anyone can help in this :- I have two files 1) Insert.txt 2) partition_list.txt insert.txt looks like this :- insert into emp1 partition (partition_name) (a1, b2, c4, s6, d8) select a1, b2, c4, (2 Replies)
Discussion started by: nubie2linux
2 Replies

10. UNIX for Beginners Questions & Answers

Use strings from nth field from one file to match strings in entire line in another file, awk

I cannot seem to get what should be a simple awk one-liner to work correctly and cannot figure out why. I would like to use patterns from a specific field in one file as regex to search for matching strings in the entire line ($0) of another file. I would like to output the lines of File2 which... (1 Reply)
Discussion started by: jvoot
1 Replies
pods::SDL::GFX::ImageFilter(3pm)			User Contributed Perl Documentation			  pods::SDL::GFX::ImageFilter(3pm)

NAME
SDL::GFX::ImageFilter - image filtering functions CATEGORY
TODO, GFX METHODS
MMX_detect int gfx_image_MMX_detect() CODE: SDL_imageFilterMMXdetect(); MMX_off void gfx_image_MMX_off() CODE: SDL_imageFilterMMXoff(); MMX_on void gfx_image_MMX_on() CODE: SDL_imageFilterMMXon(); add int gfx_image_add(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterAdd(Src1, Src2, Dest, length); OUTPUT: RETVAL mean int gfx_image_mean(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMean(Src1, Src2, Dest, length); OUTPUT: RETVAL sub int gfx_image_sub(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterSub(Src1, Src2, Dest, length); OUTPUT: RETVAL abs_diff int gfx_image_abs_diff(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterAbsDiff(Src1, Src2, Dest, length); OUTPUT: RETVAL mult int gfx_image_mult(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMult(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_nor int gfx_image_mult_nor(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultNor(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_div_by_2 int gfx_image_mult_div_by_2(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultDivby2(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_div_by_4 int gfx_image_mult_div_by_4(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultDivby4(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_and int gfx_image_bit_and(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitAnd(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_or int gfx_image_bit_or(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitOr(Src1, Src2, Dest, length); OUTPUT: RETVAL div int gfx_image_div(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterDiv(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_negation int gfx_image_bit_negation(Src1, Dest, length) unsigned char *Src1 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitNegation(Src1, Dest, length); OUTPUT: RETVAL add_byte int gfx_image_add_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterAddByte(Src1, Dest, length, C); OUTPUT: RETVAL add_uint int gfx_image_add_uint(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned int C CODE: RETVAL = SDL_imageFilterAddUint(Src1, Dest, length, C); OUTPUT: RETVAL add_byte_to_half int gfx_image_add_byte_to_half(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterAddByteToHalf(Src1, Dest, length, C); OUTPUT: RETVAL sub_byte int gfx_image_sub_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterSubByte(Src1, Dest, length, C); OUTPUT: RETVAL sub_uint int gfx_image_sub_uint(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned int C CODE: RETVAL = SDL_imageFilterSubUint(Src1, Dest, length, C); OUTPUT: RETVAL shift_right int gfx_image_shift_right(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftRight(Src1, Dest, length, N); OUTPUT: RETVAL shift_right_uint int gfx_image_shift_right_uint(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftRightUint(Src1, Dest, length, N); OUTPUT: RETVAL mult_by_byte int gfx_image_mult_by_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterMultByByte(Src1, Dest, length, C); OUTPUT: RETVAL shift_right_and_mult_by_byte int gfx_image_shift_right_and_mult_by_byte(Src1, Dest, length, N, C) unsigned char *Src1 unsigned char *Dest int length unsigned char N unsigned char C CODE: RETVAL = SDL_imageFilterShiftRightAndMultByByte(Src1, Dest, length, N, C); OUTPUT: RETVAL shift_left_byte int gfx_image_shift_left_byte(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeftByte(Src1, Dest, length, N); OUTPUT: RETVAL shift_left_uint int gfx_image_shift_left_uint(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeftUint(Src1, Dest, length, N); OUTPUT: RETVAL shift_left int gfx_image_shift_left(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeft(Src1, Dest, length, N); OUTPUT: RETVAL binarize_using_threshold int gfx_image_binarize_using_threshold(Src1, Dest, length, T) unsigned char *Src1 unsigned char *Dest int length unsigned char T CODE: RETVAL = SDL_imageFilterBinarizeUsingThreshold(Src1, Dest, length, T); OUTPUT: RETVAL clip_to_range int gfx_image_clip_to_range(Src1, Dest, length, Tmin, Tmax) unsigned char *Src1 unsigned char *Dest int length unsigned char Tmin unsigned char Tmax CODE: RETVAL = SDL_imageFilterClipToRange(Src1, Dest, length, Tmin, Tmax); OUTPUT: RETVAL normalize_linear int gfx_image_normalize_linear(Src1, Dest, length, Cmin, Cmax, Nmin, Nmax) unsigned char *Src1 unsigned char *Dest int length int Cmin int Cmax int Nmin int Nmax CODE: RETVAL = SDL_imageFilterNormalizeLinear(Src1, Dest, length, Cmin, Cmax, Nmin, Nmax); OUTPUT: RETVAL convolve_kernel_3x3_divide int gfx_image_convolve_kernel_3x3_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel3x3Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_5x5_divide int gfx_image_convolve_kernel_5x5_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel5x5Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_7x7_divide int gfx_image_convolve_kernel_7x7_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel7x7Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_9x9_divide int gfx_image_convolve_kernel_9x9_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel9x9Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_3x3_shift_right int gfx_image_convolve_kernel_3x3_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel3x3ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_5x5_shift_right int gfx_image_convolve_kernel_5x5_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel5x5ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_7x7_shift_right int gfx_image_convolve_kernel_7x7_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel7x7ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_9x9_shift_right int gfx_image_convolve_kernel_9x9_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel9x9ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL sobel_x int gfx_image_sobel_x(Src, Dest, rows, columns) unsigned char *Src unsigned char *Dest int rows int columns CODE: RETVAL = SDL_imageFilterSobelX(Src, Dest, rows, columns); OUTPUT: RETVAL sobel_x_shift_right int gfx_image_sobel_x_shift_right(Src, Dest, rows, columns, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns unsigned char NRightShift CODE: RETVAL = SDL_imageFilterSobelXShiftRight(Src, Dest, rows, columns, NRightShift); OUTPUT: RETVAL align_stack void gfx_image_align_stack() CODE: SDL_imageFilterAlignStack(); restore_stack void gfx_image_restore_stack() CODE: SDL_imageFilterRestoreStack(); AUTHORS
See "AUTHORS" in SDL. perl v5.14.2 2012-05-28 pods::SDL::GFX::ImageFilter(3pm)
All times are GMT -4. The time now is 03:17 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy