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Shell Programming and Scripting
Cp & skipping exiting files
Post 302962832 by Scott on Friday 18th of December 2015 10:31:20 PM
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LEARN ABOUT DEBIAN
mincpik
MINCPIK(1) MINC User's Guide MINCPIK(1) NAME
mincpik - generate images from minc files SYNOPSIS
mincpik [options] <infile>.mnc [<image.type>] DESCRIPTION
mincpik generates image files from MINC volumes using the Imagemagick convert utility. For a complete list of output file types see the convert man pages. Currently if there is a time dimension in the file the image will only produced from the first time point General options -verbose print out extra information -clobber overwrite the output file if it exists already -fake usually used in combination with -verbose to echo commands only -slice slice number to get (note this is in voxel co-ordinates) -scale scaling factor for resulting image, by default images are output at twice their original resolution -width autoscale the resulting image to have a fixed image width (in pixels) -depth bit-depth for resulting image 8 or 16 (MSB machines only) -title add a title to the resulting image, if just this option is specified the text used for the title is the name of the input image file. -title_text specify the title text to use. This option must be used in conjunction with -title Image range and lookup table options -range min max valid range of values to use from MINC file -image_range min max range of image values to use for pixel intensity -auto_range automatically determine image range using a 5 and 95% PcT. (histogram) -lookup arguments arguments to pass to minclookup Slicing options -transverse get a transverse slice -axial synonym for transverse -coronal get a coronal slice -sagittal get a sagital slice -allthree this option is deprecated, use -triplanar instead Triplanar options -triplanar create a triplanar view of the input MINC file -tilesize pixel size for each image in a triplanar -sagittal_offset offset the saggital slice from the centre in the triplanar -vertical create a vertical triplanar series of images (this is the default) -horizontal create a horizontal triplanar instead of a vertical one Generic options for all commands: -help Print summary of command-line options and abort. AUTHOR
Andrew Janke - <a.janke@gmail.com> SEE ALSO
minclookup(1), convert(1), display(1). $Date: 2009-08-11 13:49:19 $ MINCPIK(1)