10-27-2015
Hi RudiC, thank you, will this help deal with the 345 million records in the score table problem? Is there a way we can avoid the 3 for loops? Thanks a lot for your help.
9 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
i get text files with
Action & Adventure|2012: Supernova NR|2009-11-01 00:01:00|2010-05-01 23:59:00|Active|3
Action & Adventure|50 Dead Men Walking|2010-01-05 00:01:00|2010-06-30 23:59:00|Active|4
Action & Adventure|Afterwards|2009-11-26 00:01:00|2010-03-26 23:59:00|Deactivated|6
Based... (3 Replies)
Discussion started by: ramse8pc
3 Replies
2. UNIX for Dummies Questions & Answers
Hi,
I'm trying to assign a score to each row which will allow me to identify which rows differ. In the example file below, I've used "," to indicate column separators (my actual file has tab separators). In this example, I'd like to identify that row 1 and row 5 are the same, and row 2 and row... (4 Replies)
Discussion started by: auburn
4 Replies
3. UNIX for Advanced & Expert Users
Hey everyone.
I am trying to figure out a way to create a file that will be renamed based off of one of multiple files. For example, if I have 3 files (cat.ctl, dog.ctl, and bird.ctl) that gets placed on to an ftp site I want to create a single file called new.cat.ctl, new.dog.ctl, etc for each... (3 Replies)
Discussion started by: coach5779
3 Replies
4. Shell Programming and Scripting
Hi All,
I have a file which looks like this:
234422 1 .00222
323232 1 3232
32323 1 0.00222
1234 2 1211
2332 2 0.9
233 3 0.883
123 3 45
As you can see, the second column of the file is already sorted which I did using sort command.
Now, I want to create files based on the second... (1 Reply)
Discussion started by: shoaibjameel123
1 Replies
5. UNIX for Dummies Questions & Answers
I have to create a bunch of functional (non-user) accounts that are owned by 1 person. And I create several of these functional accounts each day so there are several owners. Is there a way to make a password based off an algorithm that uses the owners identification number, so all accounts I... (2 Replies)
Discussion started by: MaindotC
2 Replies
6. Shell Programming and Scripting
I have two files with thousands of sequences of different lengths. infile1 contains the actual sequences and infile2 the scores for each A, T, G and C in infile1. Something like this:
infile1:
>HZVJKYI01ECH5R
TTGATGTGCCAGCTGCCGTTGGTGTGCCAA
>HZVJKYI01AQWJ8
GGATATGATGATGAACTGGTTTGGCACACC... (4 Replies)
Discussion started by: Xterra
4 Replies
7. Shell Programming and Scripting
hi,
i need help to create a table from an input file like this:-
DB|QZX3 140 165 RT_2 VgGIGvGVR
DB|QZX3 155 182 UT_1 rlgslqqLaIvlGiFT
DB|QZX3 345 362 RT_1 GRKpllligS
DB|ZXK6 174 199 RT_2 IstvtvptYlgEiatvkaR
DB|ZXK6 189 216 UT_1 algtiyqLfLviGiLF
DB|AZ264 15 17... (7 Replies)
Discussion started by: redse171
7 Replies
8. UNIX for Dummies Questions & Answers
Hello masters,
I am filtering data based on completeness. A (Name , Group) combination in File2 is only complete when it has data for all subgroups specified in File1.
All incomplete (Name , Group) combinations do not appear in the output.
So for example , Name1 Group 1 in File2 is... (6 Replies)
Discussion started by: senhia83
6 Replies
9. UNIX for Beginners Questions & Answers
I have looked through several threads regarding merging files with awk and attempted using join however have been unsuccessful likely as I do not fully understand awk.
What I am attempting is to take a csv file which could be between 1 and 15,000 lines with 5 colums and another csv file that will... (4 Replies)
Discussion started by: cdubu2
4 Replies
LEARN ABOUT REDHAT
zgbequ
ZGBEQU(l) ) ZGBEQU(l)
NAME
ZGBEQU - compute row and column scalings intended to equilibrate an M-by-N band matrix A and reduce its condition number
SYNOPSIS
SUBROUTINE ZGBEQU( M, N, KL, KU, AB, LDAB, R, C, ROWCND, COLCND, AMAX, INFO )
INTEGER INFO, KL, KU, LDAB, M, N
DOUBLE PRECISION AMAX, COLCND, ROWCND
DOUBLE PRECISION C( * ), R( * )
COMPLEX*16 AB( LDAB, * )
PURPOSE
ZGBEQU computes row and column scalings intended to equilibrate an M-by-N band matrix A and reduce its condition number. R returns the row
scale factors and C the column scale factors, chosen to try to make the largest element in each row and column of the matrix B with ele-
ments B(i,j)=R(i)*A(i,j)*C(j) have absolute value 1.
R(i) and C(j) are restricted to be between SMLNUM = smallest safe number and BIGNUM = largest safe number. Use of these scaling factors is
not guaranteed to reduce the condition number of A but works well in practice.
ARGUMENTS
M (input) INTEGER
The number of rows of the matrix A. M >= 0.
N (input) INTEGER
The number of columns of the matrix A. N >= 0.
KL (input) INTEGER
The number of subdiagonals within the band of A. KL >= 0.
KU (input) INTEGER
The number of superdiagonals within the band of A. KU >= 0.
AB (input) COMPLEX*16 array, dimension (LDAB,N)
The band matrix A, stored in rows 1 to KL+KU+1. The j-th column of A is stored in the j-th column of the array AB as follows:
AB(ku+1+i-j,j) = A(i,j) for max(1,j-ku)<=i<=min(m,j+kl).
LDAB (input) INTEGER
The leading dimension of the array AB. LDAB >= KL+KU+1.
R (output) DOUBLE PRECISION array, dimension (M)
If INFO = 0, or INFO > M, R contains the row scale factors for A.
C (output) DOUBLE PRECISION array, dimension (N)
If INFO = 0, C contains the column scale factors for A.
ROWCND (output) DOUBLE PRECISION
If INFO = 0 or INFO > M, ROWCND contains the ratio of the smallest R(i) to the largest R(i). If ROWCND >= 0.1 and AMAX is neither
too large nor too small, it is not worth scaling by R.
COLCND (output) DOUBLE PRECISION
If INFO = 0, COLCND contains the ratio of the smallest C(i) to the largest C(i). If COLCND >= 0.1, it is not worth scaling by C.
AMAX (output) DOUBLE PRECISION
Absolute value of largest matrix element. If AMAX is very close to overflow or very close to underflow, the matrix should be
scaled.
INFO (output) INTEGER
= 0: successful exit
< 0: if INFO = -i, the i-th argument had an illegal value
> 0: if INFO = i, and i is
<= M: the i-th row of A is exactly zero
> M: the (i-M)-th column of A is exactly zero
LAPACK version 3.0 15 June 2000 ZGBEQU(l)