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Top Forums Shell Programming and Scripting Merge and Sort tabular data from different text files Post 302957779 by Syeda Sumayya on Thursday 15th of October 2015 01:30:40 AM
Old 10-15-2015
Computer Merge and Sort tabular data from different text files

I have 42 text files; each containing up to 34 lines with following structure;

file1
Code:
H-01 23
H-03 5
H-05 9
H-02 14
.
.

file2
Code:
H-01 17
H-02 43
H-04 7
H-05 8
H-03 7
.
.

file3
Code:
H-01 11
H-05 14
H-04 2
H-02 8
H-06 7
.
.

My desired output;
Code:
     file1 file2 file3 . . . file42
H-01 23 17 11
H-02 14 43 8
H-03 5 7 -
H-04 - 7 2
H-05 9 8 14
H-06 - - 7
.
.

The resulting file will contain a data matrix of 42 columns and 34 fields (excluding the headers). I have tried grep, but it prints the first occurrence only. Kindly help me.

Last edited by Syeda Sumayya; 10-15-2015 at 04:57 AM.. Reason: Description was not so clear.
 

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comm(1) 						      General Commands Manual							   comm(1)

NAME
comm - select or reject lines common to two sorted files SYNOPSIS
file1 file2 DESCRIPTION
comm reads file1 and file2, which should be ordered in increasing collating sequence (see sort(1) and Environment Variables below), and produces a three-column output: Column 1: Lines that appear only in file1, Column 2: Lines that appear only in file2, Column 3: Lines that appear in both files. If is used for file1 or file2, the standard input is used. Options 1, 2, or 3 suppress printing of the corresponding column. Thus prints only the lines common to the two files; prints only lines in the first file but not in the second; does nothing useful. EXTERNAL INFLUENCES
Environment Variables determines the collating sequence expects from the input files. determines the language in which messages are displayed. If is not specified in the environment or is set to the empty string, the value of determines the language in which messages are displayed. If is not specified in the environment or is set to the empty string, the value of is used as a default. If is not specified or is set to the empty string, a default of ``C'' (see lang(5)) is used instead of If any internationalization variable contains an invalid setting, behaves as if all internationalization variables are set to ``C''. See environ(5). International Code Set Support Single- and multi-byte character code sets are supported. EXAMPLES
The following examples assume that and have been ordered in the collating sequence defined by the or environment variable. Print all lines common to and (in other words, print column 3): Print all lines that appear in but not in (in other words, print column 1): Print all lines that appear in but not in (in other words, print column 2): SEE ALSO
cmp(1), diff(1), sdiff(1), sort(1), uniq(1). STANDARDS CONFORMANCE
comm(1)
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