Seems you want lines which have strings either UNKNOWN or CRITICAL in single line. The method used by you will look for a line which has both strings in it, since there is no line like that in input file provided by you so result is correct which is NULL, use below and let me know if that helps you.
Hi,
I have to search those statements from the file which starts from "shanky"(only shanky, shanky09 or 09shanky is not allowed) and ends with ");". These two string can be in a same line or different line. And also i have to negate those lines which starts with #.
Can any one please give me... (2 Replies)
How can I pass $var_find variable as argment to find command?
test.sh
var_find=' \( -name "*.xml" -o -name "*.jsp" \) '
echo "${var_find}"
find . -type f ${var_find} -print
# Below statement works fine.. I want to replace this with the above..
#find . \( -name "*.xml" -o -name... (4 Replies)
Hello All,
I have a file which is having below type of data,
Jul 19 2011 | 123456
Jul 19 2011 | 123456
Jul 20 2011 | 123456
Jul 20 2011 | 123456
Here I wanted to grep for date pattern as below, so that it should only grep "Jul 20" OR "Jul ... (9 Replies)
user 10
values
content is:
musage.py
yes
value
user 11
values
content is:
gusage.py
yes
value
how to print "user" string line by searching "content is:" string and "usage.py" string in perl (8 Replies)
Hello :)
I have this file
cat employee_list
Name : jack
Gender: m
ID : 4512
DOB : 03/27/1980
hire date : 04/23/2012
Nationality: US
marital status : single
=====================
Name : mick
Gender: m
ID : 1256
DOB : 03/27/1970
Hire date : 012/10/2011
Nationality: US
Marital... (4 Replies)
Want to fetch a column with multiple pattern using awk.
How to achieve the same.
Tried
cat test
address : 10.63.20.92/24
address : 10.64.22.93/24
address : 10.53.40.91/24
cat test | awk '{print $3}' |awk -F "/" '{print $1}'
10.63.20.92
10.64.22.93
10.53.40.91
Is there any... (2 Replies)
I am working on AIX operating system.
I want to search list of Article Id for given Set Date (which are present in a seperate file input.txt)
art_list.csv
------------
"Article ID" |"Ad Description" |"Pyramid"|"Pyramid Desc "|"ProductTypeId"|"Set Date "|... (3 Replies)
#!/usr/bin/ksh
a="Run successfully"
cd $APPS
ls -l *.txt | while read $txt
do
if then
cp $APPS/$txt cp $hist/$txt
else
rm $APPS/$txt
echo "Files has been removed"
fi
done
New in shell script please help me out
Around 100 txt files in $APPS dir i want to search pattern from... (8 Replies)
Discussion started by: Kalia
8 Replies
LEARN ABOUT DEBIAN
re-pcr
RE-PCR(1) General Commands Manual RE-PCR(1)NAME
re-PCR -- Find sequence tagged sites (STS) in DNA sequences
SYNOPSIS
re-PCR [-hV] -p hash-file [-g gaps] [-n mism] [-lq] [primer ...]
re-PCR [-hV] -P hash-file [-g gaps] [-n mism] [-l] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [primers-file ...]
re-PCR [-hV] -s hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-o outfile] [-r+|-] [left right lo[-hi] [...]]
re-PCR [-hV] -S hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [stsfile ...]
DESCRIPTION
Implements reverse searching (called Reverse e-PCR) to make it feasible to search the human genome sequence and other large genomes by per-
forming STS and primer searches.
OPTIONS -p=hash-file
Perform primer lookup using hash-file
-P=hash-file
Perform primer lookup using hash-file
-s=hash-file
Perform STS lookup using hash-file
-S=hash-file
Perform STS lookup using hash-file
-n=mism Set max allowed mismatches per primer for lookup
-g=gaps Set max allowed indels per primer for lookup
-m=margin Set variability for STS size for lookup
-l Use presize alignments (only if gaps>0)
-G Print alignments in comments
-d=min-max
Set default STS size
-r=+|- Enable/disable reverse STS lookup
-O=+|- Enable/disable syscall optimisation
-C=batchcnt
Set number of STSes per batch
-o=outfile
Set output file name
-q Quiet (no progress indicator)
EXAMPLE
famap -tN -b genome.famap org/chr_*.fa
fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap
re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200
See famap(1) and fahash(1)SEE ALSO
/usr/share/doc/ncbi-epcr/README.txt
bioperl(1), e-pcr(1), famap(1) and fahash(1)AUTHORS
This manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others). Permission is granted
to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by
the Free Software Foundation.
On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.
April 2008 RE-PCR(1)