So I tried to map it out and explain the steps as well. The script is attached as well and it seems to work for the most part except for the two sections I added. I apologize in advance if I posted the text incorrectly I tried to follow a similar post. Thank you .
Code:
menu -> gjb2 -> name -> check -> position -> parse -> add2text -> additional? -> annovar -> menu or message and exit
^ ^
| |
| |
user mecp2 -> name -> check -> position -> parse -> add2text -> additional? -> annovar -> menu or message and exit
choice ^
|
|
phox2b -> name -> check -> position -> parse -> add2text -> additional? -> annovar -> menu or message and exit
^
|
|
+----------------------------------------------------------------------------------------------------------+
^
|
|
exit
Code:
menu choice - user is prompted for selection (4 choices)
selection - each selection has unique transcript assigned
name - python script to verify name syntax
check - user prompted to verify naming correct (Y/N) - after python script is run results of that appear on screen, so that the prompt can be answered
if the answer is "Y" then next function (position), if "n" then return to function gjb2 and ${id}.txt cleared
position - python script to transfer ${id}.txt to annovar directory and convert to coordinates
parse - parse specific field to create ${id}_parse.txt
add2text - ${id}.txt is added to sanger.txt
additional - user is asked for additional data (Y/N) - if "Y" then goto to gjb2 function, if "N" then goto annovar function
annovar - perl script run on ${id}_parse.txt
after the script is run the user is told its completed and asked if there is more to do(Y/N) - if "Y" then menu function, if "N" then message and exit
I have been trying to write a very basic chat program but at the moment I am having problems getting it to be multiuser as it closes all connections when one client shutsdown. I have also been having problems trying to get the program to display a list of usernames to the clients. I have tried... (0 Replies)
I have a main menu
quit=n
while
do
clear
echo
echo "1. General system information"
echo "2. Hardware utilisation information"
echo "3. File management"
echo "4. User information"
echo "5. Information on network connectivity"
echo "6. Information on processes"
echo "Q.Quit" ... (3 Replies)
Greetings all,
I'm having some trouble writing a menu drive bash script, actually coding the menu part was not difficult however its a problem with a menu option I'm having trouble with.
My menu has 5 options, when the user selects the second option, they are then prompted to enter a number from... (5 Replies)
Hi again :)
This is just a sample whiptail menu.
Works great, but have been trying to get the chosen value into a variable but failing pretty bad...its ther but unsure how to echo it out when needed
#! /bin/bash
#This is the menu
whiptail --title "Menu example" --menu "Choose an... (9 Replies)
Hi,
In the archives I found this:
And this works fine.
$if mode=vi
"\C-0-": digit-argument
TAB: menu-complete
"\e
But what I want is to reverse this. So I want that tab does reverse menu completion and shift tab does normal menu completion.
Can anyone help me with this? Thanks (0 Replies)
Hello,
Been trying to build a menu with whiptail lately. However, my code doesn't seems to be working even though when i compared to other similar code they looks the same.
#!/bin/bash
clear
whiptail --msgbox "Entering networking sub-menu" 20 78
whiptail --title Networking --menu... (8 Replies)
The perl command is not executing? I am trying to run the .pl in my cygwin home directory (C:\cygwin\home\cmccabe) using ${id}.txt.hg19_multianno.txt (located in the annovar directory) as the input file to be formatted and $FILENAME is the output file to be saved. The .pl is attached as... (8 Replies)
I am beginning to write a new version of the bash menu below. The previous version worked great and now when I start the updated bash it opens and a some lines print in the terminal and it closes quickly. I know there are errors but how can I see them or fix them, I tried set -x with the same... (12 Replies)
Hi, I'm new to bash, and have an example menu script using Zenity. It works fine if the user enters A B or C, but if the user enters nothing, I can only figure out how to exit the script. How do I get the menu to reappear if no input is selected?
The script is:
title="Select example"... (2 Replies)
Hello everyone,
This code is working right using mate-terminal but with xfce4-terminal for some reason, it open up an extra tab...
Could someone please help me out to understand why this is happening?
#!/bin/bash
cd "$(dirname "$0")"/files
tab=" --tab"
title=" --title"
options=()... (2 Replies)
Discussion started by: soichiro
2 Replies
LEARN ABOUT CENTOS
dh_installmenu
DH_INSTALLMENU(1) Debhelper DH_INSTALLMENU(1)NAME
dh_installmenu - install Debian menu files into package build directories
SYNOPSIS
dh_installmenu [debhelperoptions] [-n]
DESCRIPTION
dh_installmenu is a debhelper program that is responsible for installing files used by the Debian menu package into package build
directories.
It also automatically generates the postinst and postrm commands needed to interface with the Debian menu package. These commands are
inserted into the maintainer scripts by dh_installdeb(1).
FILES
debian/package.menu
Debian menu files, installed into usr/share/menu/package in the package build directory. See menufile(5) for its format.
debian/package.menu-method
Debian menu method files, installed into etc/menu-methods/package in the package build directory.
OPTIONS -n, --no-scripts
Do not modify postinst/postrm scripts.
SEE ALSO debhelper(7)update-menus(1)menufile(5)
This program is a part of debhelper.
AUTHOR
Joey Hess <joeyh@debian.org>
11.1.6ubuntu2 2018-05-10 DH_INSTALLMENU(1)
03-12-2015
.