I have a very large file (10,000,000 lines), that contains a sample id and a property of that sample. I have another file that contains around 1,000,000 lines with sample ids that I want to remove from the original file (create a new file without these lines).
I know how to do this in Perl, but it... (9 Replies)
I am new to shell scripting and need some help. I googled, but couldn't find a similar scenario.
Basically, I need to rename a datafile. This is the scenario -
I have a file, readonly.txt that has 2 columns - file# and name.
I have another file,missing_files.txt that has id and name. Both the... (3 Replies)
Hi all,
I have been searching online to find the answer for getting a list of files that do not match certain criteria but have been unsuccessful.
I have a directory that has many jpg files. What I need to do is get a list of the files that do not match both of the following patterns (I have... (21 Replies)
Dear awk users,
I am trying to use awk to match records across two moderately large CSV files. File1 is a pattern file with 173,200 lines, many of which are repeated. The order in which these lines are displayed is important, and I would like to preserve it. File2 is a data file with 456,000... (3 Replies)
I have two files. The first containing a header and six columns of data.
Example file 1:
Number SNP ID dbSNP RS ID Chromosome Result_Call Physical Position
787066 SNP_A-8575395 RS6650104 1 NOCALL 564477
786872 SNP_A-8575125 RS10458597 1 AA ... (13 Replies)
Hi,
i have been trying to extract multiple lines based on two different patterns as below:-
file1
@jkm|kdo|aas012|192.2.3.1 blablbalablablkabblablabla
sjfdsakfjladfjefhaghfagfkafagkjsghfalhfk
fhajkhfadjkhfalhflaffajkgfajkghfajkhgfkf
jahfjkhflkhalfdhfwearhahfl
@jkm|sdf|wud08q|168.2.1.3... (8 Replies)
Hi all,
I have a file , which has 6 tab delimited fields, with $3 and $4 subfielded with spaces. I wamt to match cols $2,$3,$4 of tmp1 with tmp2, ..and then flag the 5th col if found.
tmp1
1756 Xerm XermA XermB XermC XermD AA TT AA GG A 1
1763 Xerm XermA XermB XermC... (3 Replies)
In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
I need to print field and the next one if field matches 'patternA' and also print 'patternB' fields.
echo "some output" | awk '{for(i=1;i<=NF;i++){if($i ~ /patternA/){print $i, $(i+1)}elif($i ~ /patternB/){print $i}}}'
This code returnes me 'syntax error'. Pls advise how to do properly. (2 Replies)
Discussion started by: urello
2 Replies
LEARN ABOUT SUSE
case
case(n) Tcl Built-In Commands case(n)
__________________________________________________________________________________________________________________________________________________NAME
case - Evaluate one of several scripts, depending on a given value
SYNOPSIS
case string ?in? patList body ?patList body ...?
case string ?in? {patList body ?patList body ...?}
_________________________________________________________________DESCRIPTION
Note: the case command is obsolete and is supported only for backward compatibility. At some point in the future it may be removed
entirely. You should use the switch command instead.
The case command matches string against each of the patList arguments in order. Each patList argument is a list of one or more patterns.
If any of these patterns matches string then case evaluates the following body argument by passing it recursively to the Tcl interpreter
and returns the result of that evaluation. Each patList argument consists of a single pattern or list of patterns. Each pattern may con-
tain any of the wild-cards described under string match. If a patList argument is default, the corresponding body will be evaluated if no
patList matches string. If no patList argument matches string and no default is given, then the case command returns an empty string.
Two syntaxes are provided for the patList and body arguments. The first uses a separate argument for each of the patterns and commands;
this form is convenient if substitutions are desired on some of the patterns or commands. The second form places all of the patterns and
commands together into a single argument; the argument must have proper list structure, with the elements of the list being the patterns
and commands. The second form makes it easy to construct multi-line case commands, since the braces around the whole list make it unneces-
sary to include a backslash at the end of each line. Since the patList arguments are in braces in the second form, no command or variable
substitutions are performed on them; this makes the behavior of the second form different than the first form in some cases.
SEE ALSO
switch(n)
KEYWORDS
case, match, regular expression
Tcl 7.0 case(n)