The input file is attached. If I run the code below:
a file called average.txt results that combines all the baita that match (chr....) and calculates the average # of reads.
The first three lines of average.txt:
The text is the bait followed by the average # of reads, in the input file each bait is outputted over and over again in different positions and thw script combines the baits that match and calculates the #'s of each.
Is it possible to output the length of the bait, average # of reads, and the # calculated ...x coverage (3 of reads * 150/length)? Thank you .
the formula is not needed, I was just trying to show how the coverage is calculated.
I'm trying to have a loop print out statistics every X number of seconds. How can I add a specific number of seconds to a time variable and make a comparison? Thanks ahead of time.
For example:
startTime = `date +%H%M%S`
currentTime = $startTime
executeTime = startTime + X # X is equal... (5 Replies)
hi all,
was wondering if there is another way to do calculations in ksh scripts other than using bc ?? i am using a script to calculate average response time and my script errors out after running for a bit.
e.g code i am using :
averageTime=$(print "$totalTime / $numberOfEntries" |... (2 Replies)
I need to be able to use the current date and calculate 7 days ago to be stored in another variable to be passed to a file in my Unix shell script. I need the date in the following format:
date '+%m/%d/%Y'
or
05/16/2006
How do I calculate date minus 7 days or 1 week ago? (8 Replies)
HI
i have following problem,
i need to use split command to split files each should be cca 700 lines but i dont know how to inplement it in the scripts becasuse each time the origin file will be various size ,
any body got any idea
cheers (2 Replies)
Dear All,
I have a long list like this:
337
375
364
389
443
578
1001
20100
.
.
.
.
etc
I would like to substract each value from the first entry which in this case is 337 and report it in a separate column. So the expected output looks like
337 0 (10 Replies)
Hello,
I have to turn:
Apple Inc.:325,64:329,57
into
Apple Inc.:325,64:329,57:3,93
3,93=329,57-325,64.
My code:
cat beurs.txt | sed 's/\(*\):\(*\),*\(*\):\(*\),\(*\)/\4\.\5-\2\.\3/' beurs.txt | bc| tr '.' ',' | sed 's/^-*,/0,/' > winstmarges.txt; paste -d: beurs.txt winstmarges.txt; rm... (5 Replies)
grep Quality abc.txt | awk -F"=" '{print $2}'
o/p is given as
70/70
49/70
I want in the below format (percentage format)
100%
70%
help me!!!!:confused::confused::confused:
---------- Post updated at 09:59 AM ---------- Previous update was at 09:57 AM ----------
Cell 01 -... (3 Replies)
I'm writing a script that will read all the fields of a text file into an array(if they are numeric), while at the same time computing the minimum and maximum values from the file. After that I want to output the average of all the numbers in the array.
The first problem I'm having is that many... (10 Replies)
Hello. I'm writing an awk script that looks at a .csv file and calculates the weighted grade for each student based on the scores and categories in the file. I am able to get the script to run the only issue however is that the same score for each student is the same. I'm self-teaching myself the... (1 Reply)
Discussion started by: Eric7giants
1 Replies
LEARN ABOUT MOJAVE
mpscnnpoolingaveragegradient
MPSCNNPoolingAverageGradient(3) MetalPerformanceShaders.framework MPSCNNPoolingAverageGradient(3)NAME
MPSCNNPoolingAverageGradient
SYNOPSIS
#import <MPSCNNPooling.h>
Inherits MPSCNNPoolingGradient.
Instance Methods
(nonnull instancetype) - initWithDevice:kernelWidth:kernelHeight:strideInPixelsX:strideInPixelsY:
(nullable instancetype) - initWithCoder:device:
Properties
NSUInteger zeroPadSizeX
NSUInteger zeroPadSizeY
Additional Inherited Members
Detailed Description
This depends on Metal.framework Specifies the filter for computing the gradient of the average pooling filter. The operation
backpropagates a gradient vector using chain rule.
Average pooling forward pass is defined as:
out(x) = sum_{dx in Window(x)} in(s*x+dx) / N(x), where
the pooling window definition 'Window(x)' follows MPSCNNPooling specification, 'N(x)' is effective pooling window size in pixels as
specified in MPSCNNPoolingAverage, 's' is the pixel stride and in() is the source input image.
Hence the partial derivative of the output value wrt. to the input value needed in the gradient backpropagation in MPSCNNPoolingGradient
is:
d out(x)/d in(y) = sum_{dx in Window(x)} delta_{s*x+dx, y} / N(x), where
delta_{x,y} is the Kronecker delta symbol for which
delta_{x,y} = { 1, when x == y
{ 0, otherwise.
In practice this means that the gradient value for the destination image at pixel 'x' is the sum over these contributions coming from all
pooling windows that contribute to the average pooling computation in the forward pass, multiplied by the input gradient value in the
source area of the corresponding pooling window.
Note: As average pooling is a linear operation of its inputs, the gradient does not depend at all on the original input values, but the
original input image size is needed so that we know the limits where the input values seize to exist to inhibit accumulation of gradient
values for those pixels. Therefore, as secondary input, any correctly sized image will produce correct results for the gradient
backpropagation and hence it is recommended to use a temporary image of correct size (see MPSTemporaryImage) for the secondary source image
parameter.
Method Documentation
- (nullable instancetype) initWithCoder: (NSCoder *__nonnull) aDecoder(nonnull id< MTLDevice >) device
NSSecureCoding compatability See MPSKernel::initWithCoder.
Parameters:
aDecoder The NSCoder subclass with your serialized MPSCNNPoolingAverageGradient
device The MTLDevice on which to make the MPSCNNPoolingAverageGradient
Returns:
A new MPSCNNPoolingAverageGradient object, or nil if failure.
Reimplemented from MPSCNNPoolingGradient.
- (nonnull instancetype) initWithDevice: (nonnull id< MTLDevice >) device(NSUInteger) kernelWidth(NSUInteger) kernelHeight(NSUInteger)
strideInPixelsX(NSUInteger) strideInPixelsY
Initialize a gradient average pooling filter
Parameters:
device The device the filter will run on
kernelWidth The width of the kernel. Can be an odd or even value.
kernelHeight The height of the kernel. Can be an odd or even value.
strideInPixelsX The input stride (upsampling factor) in the x dimension.
strideInPixelsY The input stride (upsampling factor) in the y dimension.
Returns:
A valid MPSCNNPoolingGradient object or nil, if failure.
Reimplemented from MPSCNNPoolingGradient.
Property Documentation
- zeroPadSizeX [read], [write], [nonatomic], [assign]
How much zero padding to apply to both left and right borders of the input image for average pooling, when using
See also:
edgeMode MPSImageEdgeModeClamp. For
edgeMode MPSImageEdgeModeZero this property is ignored and the area outside the image is interpreted to contain zeros. The zero padding
size is used to shrink the pooling window to fit inside the area bound by the source image and its padding region, but the effect is
that the normalization factor of the average computation is computed also for the zeros in the padding region.
- zeroPadSizeY [read], [write], [nonatomic], [assign]
How much zero padding to apply to both top and bottom borders of the input image for average pooling, when using
See also:
edgeMode MPSImageEdgeModeClamp. For
edgeMode MPSImageEdgeModeZero this property is ignored and the area outside the image is interpreted to contain zeros. The zero padding
size is used to shrink the pooling window to fit inside the area bound by the source image and its padding region, but the effect is
that the normalization factor of the average computation is computed also for the zeros in the padding region.
Author
Generated automatically by Doxygen for MetalPerformanceShaders.framework from the source code.
Version MetalPerformanceShaders-100 Thu Feb 8 2018 MPSCNNPoolingAverageGradient(3)