which disagrees with the output you said you wanted on the 3rd line. (Nothing in your description talked about changing the contents of the 1st field from "201" to "202" under any circumstances???)
You didn't say what OS or shell you're using. If you want to try this on a Solaris/SunOS system, change awk to /usr/xpg4/bin/awk, /usr/xpg6/bin/awk, or nawk.
Last edited by Don Cragun; 11-26-2014 at 05:52 AM..
Reason: Fix mismatched ".
This User Gave Thanks to Don Cragun For This Post:
Hi all,
Am new to scripting. So i just need your ideas to help me out. Here goes my requirement.
I have two csv files
1.csv 2.csv
abc,1.24 abc,1
def,2.13 def,1
I need to compare the first column of 1.csv with 2.csv and if matches then need to compare... (2 Replies)
Hi All,
I have two .csv's
input.csv having values as (7 columns)
ABC,A19907103,ABC DEV YUNG,2.17,1000,2157,07/07/2006
XYZ,H00213850,MM TRUP HILL,38.38,580,23308,31/08/2010
output.csv having (25 columns)
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y... (4 Replies)
I am having two csv files i need to compare these files and the output file should have the information of the differences at the field level.
For Example,
File 1:
A,B,C,D,E,F
1,2,3,4,5,6
File 2:
A,C,B,D,E,F
1,2,4,5,5,6
out put file: (12 Replies)
Hi
I have a job status csv file. I want to update the status of the job in the file.
Below is the csv file
1,jobname1,in_progress,starttime,somthing,somthing
2,jobname2,completed,starttime,somthing,somthing
3,jobname3,failed,starttime,somthing,somthing... (8 Replies)
Hi, I am newbie in shell script.
I need your help to solve my problem.
Firstly, I have 2 files of csv and i want to compare of the contents then the output will be written in a new csv file.
File1:
SourceFile,DateTimeOriginal
/home/intannf/foto/IMG_0713.JPG,2015:02:17 11:14:07... (8 Replies)
I have 8 .csv files with 16 columns and "n" rows with no Header. I want to parse each of these .csv and get column and put the data into a new.csv. Once this is done, the new.csv should have 16 columns (2 from each input.csv) and "n" rows.
Now, I want to just take the average of Column from... (3 Replies)
I am trying to parse two csv files and make a match in one column then print the entire file to a new file and append an additional column that gives description from the match to the new file. If a match is not made, I would like to add "NA" to the end of the file
Command that Ive been using... (6 Replies)
I am joining two CSV files based on 'Server_Name' column, 1st column of first file and 2nd column of second file.
If matches, output 1st and 2nd column from first file, 3rd,4th,5th,6th columns from second file.
I am expecting output CSV file as below.
Could you please send me help me with... (6 Replies)
Discussion started by: Anadmbt
6 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)