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Full Discussion: Run Bash from Windows icon?
Special Forums Windows & DOS: Issues & Discussions Run Bash from Windows icon? Post 302925642 by cmccabe on Tuesday 18th of November 2014 02:00:21 PM
Old 11-18-2014
I can't add or change software at my institution. Is it possible to execute a bash using VB in excel?

Maybe a button that the user clicks would call and execute the bash? Thank you Smilie.

---------- Post updated at 01:00 PM ---------- Previous update was at 10:25 AM ----------

I normally run a bash script in cygwin terminal using bash ~/annovar.sh. I am trying to avoid scripting and am using the VB below to call and execute a bash script. This is on a windows machine in excel 2010.

VB

Code:
Private Sub CommandButton1_Click()
Dim cmd As String
Dim ret As Double
Dim WshShell As Object
Dim plink_object As Object

' Run Linux Commands
Set WshShell = CreateObject("WScript.Shell")
On Error Resume Next
Set plink_object = WshShell.Run("C:\cygwin\bin\mintty.exe annovar.sh 66 ""50602_15:56:31_15:56:11_15:56:21;50602_15:57:07_15:56:47_15:56:57""", 1)
On Error GoTo 0
End Sub

the cygwin terminal starts but says: annovar.sh: No such file or directory

annovar.sh is in C:\cygwin\bin\

should it be somewhere else? and what does 66 ""50602_15:56:31_15:56:11_15:56:21;50602_15:57:07_15:56:47_15:56:57""", 1) refer to? Thank you Smilie.
 

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BASHBUG(1)						      General Commands Manual							BASHBUG(1)

NAME
bashbug - report a bug in bash SYNOPSIS
bashbug [--version] [--help] [email-address] DESCRIPTION
bashbug is a shell script to help the user compose and mail bug reports concerning bash in a standard format. bashbug invokes the editor specified by the environment variable EDITOR on a temporary copy of the bug report format outline. The user must fill in the appropriate fields and exit the editor. bashbug then mails the completed report to bug-bash@gnu.org, or email-address. If the report cannot be mailed, it is saved in the file dead.bashbug in the invoking user's home directory. The bug report format outline consists of several sections. The first section provides information about the machine, operating system, the bash version, and the compilation environment. The second section should be filled in with a description of the bug. The third sec- tion should be a description of how to reproduce the bug. The optional fourth section is for a proposed fix. Fixes are encouraged. ENVIRONMENT
bashbug will utilize the following environment variables if they exist: EDITOR Specifies the preferred editor. If EDITOR is not set, bashbug defaults to emacs. HOME Directory in which the failed bug report is saved if the mail fails. TMPDIR Directory in which to create temporary files and directories. SEE ALSO
bash(1) AUTHORS
Brian Fox, Free Software Foundation bfox@gnu.org Chet Ramey, Case Western Reserve University chet@po.cwru.edu GNU Bash-4.0 1998 July 30 BASHBUG(1)
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