I am trying to create a script that will use the position in column A ($1) in 48850.txt and search for it in columns B ($2) in gene.txt. Then when it finds a match it copies the text in column A ($1) and places it in column C ($3) of 48850.txt. I have attached the files. Thank you .
Code:
The first position in 48850.txt is chrX:138982061 and that is between chrX: 13789061-13956831 (row 25325 in gene.txt) and the text in column A ($1) is GPM6B. So that text would be copied to column D ($4) of 48850.txt.
48850.txt
chrX:138982061 138982120 A_16_P21610256 GPM6B
Hello all,
I would like a bit of help with a problem I am having. I have the following example file:
$ cat test_hosts
10.10.2.3 host1
10.10.2.4 host2
10.10.2.130 host3
10.10.2.5 host4
10.10.2.230 host5
10.10.2.22 host6
I need to match all IP addresses in the 10.10.2.1-10.10.2.22... (5 Replies)
if the column1 and 2 in both files has same key (for example "a" and "a1") compare each first key value(a1 of a) of input2 (for example 1-4 or 65-69 not 70-100 or 44-40 etc) with all the values in input1.
if the range of first key value in input2 is outof range in input1 values named it as out... (54 Replies)
Hi,
I have a query about joining files using data ranges.
Example files below - I want to join file1 to file2 with matches where file1 column 1 is equal to file2 column1, and file1 column 2 is within the range of file2 columns 3 and 4. I would like rows which don't match to be printed too.
... (4 Replies)
I have a file which has collection of segments occuring n(For eg.100) times
ISA
GS
ST
NM1*85
N3
N4
NM1*IL
N3
N4
REF*D9*1001
ISE
GE
SE
ISA
GS
ST
NM1*85
N3 (13 Replies)
Hi,
I'm trying to match a filename that could be called anything from vout001 to vout252 and was trying to do a small test but I'm not getting the result I thought I would..
Can some one tell me what I'm doing wrong?
*****@********>echo $mynumber ... (4 Replies)
In the files attached, I am trying to:
if Files.txt $1 is in the range of Exons.txt $1, then in Files.txt $4 the value from Exons.txt $3 is copied else if no match is found Exons.txt $3 = "Intron"
For example, the first value in File.txt $1 is chr1:14895-14944 and is not found in any range... (4 Replies)
Input: START
OS:: UNIX
Release: xxx
Version: xxx
END
START
OS:: LINUX
Release: xxx
Version: xxx
END
START
OS:: Windows
Release: xxx
Version: xxx
ENDHere i am trying to get all the information between START and END, only if i could match OS Type.
I can get all the data between the... (3 Replies)
Hi,
I need help to match patterns from between two different files and extract region of strings.
inputfile1.fa
>l-WR24-1:1
GCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGCTGGCGGCTGTGGCTCTACCCGGCTCCGG
GGCGGAGGGCGACGGCGGGTGGTGAGCGGCCCGGGAGGGGCCGGGCGGTGGGGTCACGTG... (4 Replies)
Discussion started by: bunny_merah19
4 Replies
LEARN ABOUT OSF1
xmtextfindstring
XmTextFindString(3X)XmTextFindString(3X)NAME
XmTextFindString - A Text function that finds the beginning position of a text string
SYNOPSIS
#include <Xm/Xm.h>
Boolean XmTextFindString (widget, start, string, direction, position)
Widget widget;
XmTextPosition start;
char *string;
XmTextDirection direction;
XmTextPosition *position;
DESCRIPTION
XmTextFindString locates the beginning position of a specified text string. This routine searches forward or backward for the first occur-
rence of the string starting from the given start position. If it finds a match, the function returns the position of the first character
of the string in position. Specifies the Text widget ID. Specifies the character position from which the search proceeds. This is an
integer number of characters from the beginning of the text buffer. The first character position is 0. Specifies the search string.
Indicates the search direction. It is relative to the primary direction of the text. The possible values are: The search proceeds toward
the end of the text buffer. The search proceeds toward the beginning of the text buffer. Specifies the pointer in which the first charac-
ter position of the string match is returned. This is an integer number of characters from the beginning of the buffer. The first charac-
ter position is 0. If the function returns False, this value is undefined.
For a complete definition of Text and its associated resources, see XmText(3X).
RETURN VALUE
Returns True if a string match is found; otherwise, returns False.
SEE ALSO XmText(3X), XmTextFindStringWcs(3X)XmTextFindString(3X)
10-24-2014
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