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Top Forums UNIX for Dummies Questions & Answers Select distinct sequences from fasta file and list Post 302918641 by MadeInGermany on Wednesday 24th of September 2014 02:05:29 PM
Old 09-24-2014
Have you tried
Code:
grep "FDCIR" file

?
Multiple matches:
Code:
grep -e "FDCIR" -e "ALSNG" file

or
Code:
grep "\
FDCIR
ALSNG" file

or
Code:
egrep "FDCIR|ALSNG" file

 

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ZGREP(1)						      General Commands Manual							  ZGREP(1)

NAME
zgrep - search possibly compressed files for a regular expression SYNOPSIS
zgrep [ grep_options ] [ -e ] pattern filename... DESCRIPTION
Zgrep invokes grep on compressed or gzipped files. These grep options will cause zgrep to terminate with an error code: (-[drRzZ]|--di*|--exc*|--inc*|--rec*|--nu*). All other options specified are passed directly to grep. If no file is specified, then the standard input is decompressed if necessary and fed to grep. Otherwise the given files are uncompressed if necessary and fed to grep. If the GREP environment variable is set, zgrep uses it as the grep program to be invoked. EXIT CODE
2 - An option that is not supported was specified. AUTHOR
Charles Levert (charles@comm.polymtl.ca) SEE ALSO
grep(1), gzexe(1), gzip(1), zdiff(1), zforce(1), zmore(1), znew(1) ZGREP(1)
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