I hope somebody can help me with this problem, since I would like to solve this problem using awk, but im not experienced enough with this.
I have two files which i want to match, and output the matching column name and row number.
One file contains 4 columns like this:
FILE1:
and the second file just one column with entries:
FILE2:
I want for the entries in FILE2, to find the value they match to in FILE1, within a certain range of 2 (so +/- 2). And output the column name and the row number
So the output would be:
I can do this using loops, but this takes long because of the size of the files.
Is there a way of doing this using AWK?
Sorry I don't have any code of what I tried yet. I was trying code from previous questions, but didn't really get close to what I need..
Last edited by Corona688; 09-22-2014 at 12:30 PM..
Hi,
On a similar subject, the following. I have two files:
file1.txt
dbSNP_rsID,Chromosome,Position,Gene
rs10399749,chr. 01,45162,?
rs4030303,chr. 01,72434,?
rs4030300,chr. 01,72515,?
rs940550,chr. 01,78032,?
rs13328714,chr. 01,81468,?
rs11490937,chr. 01,222077,?
rs6683466,chr.... (5 Replies)
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
I have a file like:
I would like to find lines lines with duplicate values in column 1, and retain only one based on two conditions: 1) keep line with highest value in column 3, 2) if column 3 values are equal, retain the line with the highest value in column 4.
Desired output:
I was able to... (3 Replies)
Hi,
Please excuse for often requesting queries and making R&D, I am trying to work out a possibility where i have two files field separated by pipe and another file containing only one field where there is no matching columns, Could you please advise how to merge two files.
$more... (3 Replies)
I have 2 files. File 1 has more columns (6 columns but the last column has spaces) than file 2 (file 2 has 4 columns). The entries in file 1 do not change but column 4 in file 2 can be different from the the entry in file 1. I want to create a script that reads in file 1 and then uses column 1 2... (5 Replies)
Good evening
I have the below requirements, as I am not an experts in Linux/Unix and am looking for your ideas how I can do this.
I have file called file1 and file2.
I need to get the second column which is text1_random_alphabets and find that in file 2, if it's exists then print the 3rd... (4 Replies)
there can be n number of columns but the number of columns and header name will remain same in all 3 files. Files are tab Delimited.
a.txt
Name 9/1 9/2
X 1 7
y 2 8
z 3 9
a 4 10
b 5 11
c 6 12
b.xt
Name 9/1 9/2
X 13 19
y 14 20
z 15 21
a 16 22
b 17 23
c 18 24 c.txt
Name 9/1 9/2... (14 Replies)
First I'd like to apologize if I opened a thread which is already open somewhere.
I did a bit of searching but could quite find what I was looking for, so I will try to explaing what I need.
I'm writing a script on our server, got to a point where I have two files with results. Example:
File1... (6 Replies)
Hi,
I have a tab delimited file1:
NC_013499.1 3180 3269 GQ342961.1
NC_030295.1 5925 6014 FN398100.2
NC_007915.1 6307 6396 KU529284.1
NC_013499.1 5033 5122 GQ342961.1
And a second file2:
NC_030295.1 RefSeq gene 136 5115 ... (6 Replies)
Discussion started by: Ibk
6 Replies
LEARN ABOUT MINIX
ppmquantall
ppmquantall(1) General Commands Manual ppmquantall(1)NAME
ppmquantall - run ppmquant on a bunch of files all at once, so they share a common colormap
SYNOPSIS
ppmquantall [-ext extension] ncolors ppmfile ...
DESCRIPTION
Takes a bunch of portable pixmap as input. Chooses ncolors colors to best represent all of the images, maps the existing colors to the new
ones, and overwrites the input files with the new quantized versions.
If you don't want to overwrite your input files, use the -ext option. The output files are then named the same as the input files, plus a
period and the extension text you specify.
Verbose explanation: Let's say you've got a dozen pixmaps that you want to display on the screen all at the same time. Your screen can
only display 256 different colors, but the pixmaps have a total of a thousand or so different colors. For a single pixmap you solve this
problem with ppmquant; this script solves it for multiple pixmaps. All it does is concatenate them together into one big pixmap, run
ppmquant on that, and then split it up into little pixmaps again.
(Note that another way to solve this problem is to pre-select a set of colors and then use ppmquant's -map option to separately quantize
each pixmap to that set.)
SEE ALSO ppmquant(1), ppm(5)AUTHOR
Copyright (C) 1991 by Jef Poskanzer.
27 July 1990 ppmquantall(1)