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Top Forums Shell Programming and Scripting Matching two files per column Post 302918169 by Jenna.bos on Monday 22nd of September 2014 08:10:19 AM
Old 09-22-2014
Matching two files per column

Hi,

I hope somebody can help me with this problem, since I would like to solve this problem using awk, but im not experienced enough with this.

I have two files which i want to match, and output the matching column name and row number.

One file contains 4 columns like this:
FILE1:
Code:
a         b         c         d
10.5    20.2    50.4    100.2
200.1  500.4   20.6    10.4

and the second file just one column with entries:
FILE2:
Code:
12
50
200

I want for the entries in FILE2, to find the value they match to in FILE1, within a certain range of 2 (so +/- 2). And output the column name and the row number

So the output would be:
Code:
12   a   1
50   c   1
200 a   2

I can do this using loops, but this takes long because of the size of the files.
Is there a way of doing this using AWK?

Sorry I don't have any code of what I tried yet. I was trying code from previous questions, but didn't really get close to what I need..

Last edited by Corona688; 09-22-2014 at 12:30 PM..
 

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COMM(1) 							   User Commands							   COMM(1)

NAME
comm - compare two sorted files line by line SYNOPSIS
comm [OPTION]... FILE1 FILE2 DESCRIPTION
Compare sorted files FILE1 and FILE2 line by line. When FILE1 or FILE2 (not both) is -, read standard input. With no options, produce three-column output. Column one contains lines unique to FILE1, column two contains lines unique to FILE2, and column three contains lines common to both files. -1 suppress column 1 (lines unique to FILE1) -2 suppress column 2 (lines unique to FILE2) -3 suppress column 3 (lines that appear in both files) --check-order check that the input is correctly sorted, even if all input lines are pairable --nocheck-order do not check that the input is correctly sorted --output-delimiter=STR separate columns with STR --total output a summary -z, --zero-terminated line delimiter is NUL, not newline --help display this help and exit --version output version information and exit Note, comparisons honor the rules specified by 'LC_COLLATE'. EXAMPLES
comm -12 file1 file2 Print only lines present in both file1 and file2. comm -3 file1 file2 Print lines in file1 not in file2, and vice versa. AUTHOR
Written by Richard M. Stallman and David MacKenzie. REPORTING BUGS
GNU coreutils online help: <http://www.gnu.org/software/coreutils/> Report comm translation bugs to <http://translationproject.org/team/> COPYRIGHT
Copyright (C) 2017 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>. This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. SEE ALSO
join(1), uniq(1) Full documentation at: <http://www.gnu.org/software/coreutils/comm> or available locally via: info '(coreutils) comm invocation' GNU coreutils 8.28 January 2018 COMM(1)
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