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Full Discussion: Need help in batch renaming files with bash shell script.
Top Forums Shell Programming and Scripting Need help in batch renaming files with bash shell script. Post 302913576 by SriRamKrish on Monday 18th of August 2014 02:31:07 PM
Old 08-18-2014
Need help in batch renaming files with bash shell script.
I have some 50+ files in the following format :

Code:
abcd_vish_running_ZEBRA_20140818.dat_08-14-2014_23:08:23
abcd_vish_running_ZEB-RA_20140818.dat_08-14-2014_23:08:35
abcd_vish_running_ZEB_RA_20140818.dat_08-14-2014_23:08:37
abcd_vish_running_RI-NG_20140818.dat_08-14-2014_23:08:42
abcd_vish_running_RING_20140818.dat_08-14-2014_23:08:45
abcd_vish_running_RI_NG_20140818.dat_08-14-2014_23:08:52

(ZEBRA,ZEB-RA,ZEB_RA,RI-NG,RING,RI_NG are given to just show the pattern)

i need the to rename the above files to following format :

Code:
abcd_vish_running_ZEBRA_20140818.dat
abcd_vish_running_ZEB-RA_20140818.dat
abcd_vish_running_ZEB_RA_20140818.dat
abcd_vish_running_RI-NG_20140818.dat
abcd_vish_running_RING_20140818.dat
abcd_vish_running_RI_NG_20140818.dat

Now how to achieve this with shell scripting ? I'm fairly new to scripting. Kindly help.

Cheers.
Last edited by Don Cragun; 08-18-2014 at 03:52 PM.. Reason: Add CODE tags.
 

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LEARN ABOUT LINUX

unknown

UNKNOWN(1)						      General Commands Manual							UNKNOWN(1)

NAME

       unknown - identify possible genotypes for unknowns

SYNOPSIS

       A program to rapidly identify which genotypes are possible for individuals typed as unknowns in the input pedigree.

       unknown [ -cl ]

DESCRIPTION

       unknown infers possible genotypes and mating combinations for parents with unknown genotypes for ilink(1), mlink(1) and linkmap(1).

OPTIONS

       -c     Use conditional allele frequencies.

       -l     Choose a good set of loop breakers automatically.

RETURN VALUE

       0     Successful completion

ERRORS

       10    File not found
       255   Failure

EXAMPLES

       Normally, unknown(1) is run immediately prior to its sister programs, ilink(1), mlink(1) and linkmap(1), like this:

       unknown
       mlink

FILES

       unknown(1) reads the two files pedfile.dat and datafile.dat as its own input and produces various temporary files that are used as input to
       the next program. These temporary files are ipedfile.dat, upedfile.dat, speedfile.dat and newspeedfile.dat.

NOTES

       unknown(1) is part of the FASTLINK package, which is a re-implementation of the LINKAGE suite  of  computer  tools  that  help  investigate
       genetic linkage as first proposed G.M. Lathrop, J.M. Lalouel, C. Julier, and J. Ott.

AUTHORS

       Dylan Cooper, Alejandro Schaffer, and Tony Schurtz based on work originally by Jurg Ott, Ph.D, et. al.

       This manual page was written by Elizabeth Barham <lizzy@soggytrousers.net> for the Debian GNU/Linux system (but may be used by others).

WORD-WIDE-WEB
       http://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html

SEE ALSO

       ilink(1), linkmap(1), lodscore(1), mlink(1).

								  April 15, 2003							UNKNOWN(1)
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