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Top Forums Shell Programming and Scripting Compare 2 csv files by columns, then extract certain columns of matcing rows Post 302904043 by bkane3 on Sunday 1st of June 2014 12:35:08 PM
Old 06-01-2014
Compare 2 csv files by columns, then extract certain columns of matcing rows

Hi all, I'm pretty much a newbie to UNIX. I would appreciate any help with UNIX coding on comparing two large csv files (greater than 10 GB in size), and output a file with matching columns.

I want to compare file1 and file2 by 'id' and 'chain' columns, then extract exact matching rows' remaining columns from file2 and add them to file1's columns, and remove no match rows. Also create new entries in file1 for multiple row matches from file2

For example:

Code:
$ head file1
id,chain,offer,market,repeattrips,repeater,offerdate
86246,205,1208251,34,5,t,2013-04-24
86252,205,1197502,34,16,t,2013-03-27
12682470,18,1197502,11,0,f,2013-03-28
12996040,15,1197502,9,0,f,2013-03-25
13089312,15,1204821,9,0,f,2013-04-01


Code:
$ head file2
id,chain,dept,category,company,brand,date,productsize,productmeasure,purchasequantity,purchaseamount
86246,205,7,707,1078778070,12564,2012-03-02,12,OZ,1,7.59
86246,205,63,6319,107654575,17876,2012-03-02,64,OZ,1,1.59
86246,205,97,9753,1022027929,0,2012-03-02,1,CT,1,5.99
86976,205,25,2509,107996777,31373,2012-03-02,16,OZ,1,1.99
97646,206,55,5555,107684070,32094,2012-03-02,16,OZ,2,10.38



and the desired output would be:
Code:
id,chain,dept,category,company,brand,date,productsize,productmeasure,purchasequantity,purchaseamount,offer,market,repeattrips,repeater,offerdate
86246,205,7,707,1078778070,12564,2012-03-02,12,OZ,1,7.59,1208251,34,5,t,2013-04-24
86246,205,63,6319,107654575,17876,2012-03-02,64,OZ,1,1.59,1208251,34,5,t,2013-04-24
86246,205,97,9753,1022027929,0,2012-03-02,1,CT,1,5.99,1208251,34,5,t,2013-04-24

If you leave a code please explain them a little bit

Thanks

Last edited by Scrutinizer; 06-01-2014 at 02:07 PM.. Reason: code tags
 

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comm(1) 							   User Commands							   comm(1)

NAME
comm - select or reject lines common to two files SYNOPSIS
comm [-123] file1 file2 DESCRIPTION
The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output: lines only in file1; lines only in file2; and lines in both files. If the input files were ordered according to the collating sequence of the current locale, the lines written will be in the collating sequence of the original lines. If not, the results are unspecified. OPTIONS
The following options are supported: -1 Suppresses the output column of lines unique to file1. -2 Suppresses the output column of lines unique to file2. -3 Suppresses the output column of lines duplicated in file1 and file2. OPERANDS
The following operands are supported: file1 A path name of the first file to be compared. If file1 is -, the standard input is used. file2 A path name of the second file to be compared. If file2 is -, the standard input is used. USAGE
See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2^31 bytes). EXAMPLES
Example 1 Printing a list of utilities specified by files If file1, file2, and file3 each contain a sorted list of utilities, the command example% comm -23 file1 file2 | comm -23 - file3 prints a list of utilities in file1 not specified by either of the other files. The entry: example% comm -12 file1 file2 | comm -12 - file3 prints a list of utilities specified by all three files. And the entry: example% comm -12 file2 file3 | comm -23 -file1 prints a list of utilities specified by both file2 and file3, but not specified in file1. ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE, LC_CTYPE, LC_MESSAGES, and NLSPATH. EXIT STATUS
The following exit values are returned: 0 All input files were successfully output as specified. >0 An error occurred. ATTRIBUTES
See attributes(5) for descriptions of the following attributes: +-----------------------------+-----------------------------+ | ATTRIBUTE TYPE | ATTRIBUTE VALUE | +-----------------------------+-----------------------------+ |Availability |SUNWesu | +-----------------------------+-----------------------------+ |CSI |enabled | +-----------------------------+-----------------------------+ |Interface Stability |Standard | +-----------------------------+-----------------------------+ SEE ALSO
cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5) SunOS 5.11 3 Mar 2004 comm(1)
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