I have a very large file (10,000,000 lines), that contains a sample id and a property of that sample. I have another file that contains around 1,000,000 lines with sample ids that I want to remove from the original file (create a new file without these lines).
I know how to do this in Perl, but it... (9 Replies)
Dear all,
I need to search multiple patterns and then I need to print their respective next lines. For an example, in the below table, I will look for 3 different patterns :
1) # ATC_Codes:
2) # Generic_Name:
3) # Drug_Target_1_Gene_Name:
#BEGIN_DRUGCARD DB00001
# AHFS_Codes:... (3 Replies)
I have two files. The first containing a header and six columns of data.
Example file 1:
Number SNP ID dbSNP RS ID Chromosome Result_Call Physical Position
787066 SNP_A-8575395 RS6650104 1 NOCALL 564477
786872 SNP_A-8575125 RS10458597 1 AA ... (13 Replies)
I need to print out sections (varying numbers of lines) of a file between patterns. That alone is easy enough: sed -n '/START/,/STOP/' I also need the 3 lines BEFORE the start pattern. That alone is easy enough: grep -B3 START But I can't seem to combine the two so that I get everything between the... (2 Replies)
Hi,
I want to print only lines (green-italic lines) in between first and last strings in column 9.
there are different number of lines between each strings.
10 AUGUSTUS exon 4558 4669 . - . 10.g1
10 AUGUSTUS exon 8771 8889 . ... (6 Replies)
Hi Gurus,
I have a requirement where I need to display all lines between 2 patterns except the line where the first pattern in it. I tried the following command using awk but it is printing all lines except the lines where the 2 patterns exist.
awk '/TRANSF_/{ P=1; next } /Busy/ {exit} P'... (9 Replies)
Hi
I need to egrep patterns in a file and limit number of matches to print for each matched pattern.
-m10 option is not working out in my sun solaris 5.10
Please guide me the options to achieve.
if i do head -10 , i wont be getting all pattern match results as output since for a... (10 Replies)
In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
Hi, I need to print lines which are matching with start pattern "SELECT" and END PATTERN ";" and only select the last "select" statement including the ";" .
I have attached sample input file and the desired input should be as:
INPUT FORMAT:
SELECT
ABCD,
DEFGH,
DFGHJ,
JKLMN,
AXCVB,... (5 Replies)
Discussion started by: nani2019
5 Replies
LEARN ABOUT OPENSOLARIS
fmt
fmt(1) User Commands fmt(1)NAME
fmt - simple text formatters
SYNOPSIS
fmt [-cs] [-w width | -width] [inputfile]...
DESCRIPTION
fmt is a simple text formatter that fills and joins lines to produce output lines of (up to) the number of characters specified in the -w
width option. The default width is 72. fmt concatenates the inputfiles listed as arguments. If none are given, fmt formats text from the
standard input.
Blank lines are preserved in the output, as is the spacing between words. fmt does not fill nor split lines beginning with a `.' (dot), for
compatibility with nroff(1). Nor does it fill or split a set of contiguous non-blank lines which is determined to be a mail header, the
first line of which must begin with "From".
Indentation is preserved in the output, and input lines with differing indentation are not joined (unless -c is used).
fmt can also be used as an in-line text filter for vi(1). The vi command:
!}fmt
reformats the text between the cursor location and the end of the paragraph.
OPTIONS -c Crown margin mode. Preserve the indentation of the first two lines within a paragraph, and align the left margin of
each subsequent line with that of the second line. This is useful for tagged paragraphs.
-s Split lines only. Do not join short lines to form longer ones. This prevents sample lines of code, and other such for-
matted text, from being unduly combined.
-w width | -width Fill output lines to up to width columns.
OPERANDS
inputfile Input file.
ENVIRONMENT VARIABLES
See environ(5) for a description of the LC_CTYPE environment variable that affects the execution of fmt.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWcsu |
+-----------------------------+-----------------------------+
SEE ALSO nroff(1), vi(1), attributes(5), environ(5)NOTES
The -width option is acceptable for BSD compatibility, but it may go away in future releases.
SunOS 5.11 9 May 1997 fmt(1)