Sponsored Content
Top Forums Shell Programming and Scripting Merge columns from multiple files Post 302903207 by ali.seifaddini on Monday 26th of May 2014 05:18:11 AM
Old 05-26-2014
Hi
Thanks for your response.
I have 144 files. Is it needed to put all files one by one in the script? (File1 file2...). How can be used loop for this script?
And also it is important assign name of each file to related column. Thanks

---------- Post updated at 12:48 PM ---------- Previous update was at 12:46 PM ----------

Quote:
Originally Posted by SriniShoo
Code:
awk 'BEGIN{OFS = "\t"}
  NR == FNR {a[$2 " " $3] = $6; next}
  {a[$2 " " $3] = (a[$2 " " $3] OFS $6)}
  END {for(x in a) print (x OFS a[x])}' file1 file2 file3...

Hi
Thanks for your response.
I have 144 files. Is it needed to put all files one by one in the script? (File1 file2...). How can be used loop for this script?
And also it is important assign name of each file to related column. Thanks
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

merge the two files which has contain columns

Hi may i ask how to accomplish this task: I have 2 files which has multiple columns first file 1 a 2 b 3 c 4 d second file 14 a 9 .... 13 b 10.... 12 c 11... 11 d 12... I want to merge the second file to first file that will looks like this ... (2 Replies)
Discussion started by: jao_madn
2 Replies

2. UNIX for Dummies Questions & Answers

Merge two files with two columns being similar

Hi everyone. How can I merge two files, where each file has 2 columns and the first columns in both files are similar? I want all in a file of 4 columns; join command removes the duplicate columns. 1 Dave 2 Mark 3 Paul 1 Apple 2 Orange 3 Grapes to get it like this in the 3rd file:... (9 Replies)
Discussion started by: Atrisa
9 Replies

3. Shell Programming and Scripting

Merge columns of different files

Hi, I have tab limited file 1 and tab limited file 2 The output should contain common first column vales and corresponding 2nd column values; AND also unique first column value with corresponding 2nd column value of the file that contains it and 0 for the second file. the output should... (10 Replies)
Discussion started by: polsum
10 Replies

4. UNIX for Dummies Questions & Answers

How do I merge multiple columns into one column?

Hi all, I'm looking for a way to merge multiple columns (from one file) into a single column in an output file. The file I have looks somewhat like this: @HWI-ST212 1:N:0 AGTCCTACCGGGAGT + @@@DDDDDHHHHHII @HWI-ST212 1:N:0 CGTTTAAAAATTTCT + @;@B;DDDDH?:F;F... (4 Replies)
Discussion started by: Vnguyen
4 Replies

5. UNIX for Dummies Questions & Answers

Merge columns from multiple files

Hi all, I've searched the web for a long time trying to figure out how to merge columns from multiple files. I know paste will append columns like so: paste file1 file2 file3 file4 file5 ... But this becomes inconvenient when you want to append a large number of files into a single file. ... (2 Replies)
Discussion started by: torchij
2 Replies

6. Shell Programming and Scripting

Merge columns on different files

Hello, I have two files that have this format: file 1 86.82 0.00 86.82 43.61 86.84 0.00 86.84 43.61 86.86 0.00 86.86 43.61 86.88 0.00 86.88 43.61 file 2 86.82 0.22 86.84 0.22 86.86 0.22 86.88 0.22 I would like to merge these two files such that the final file looks like... (5 Replies)
Discussion started by: kayak
5 Replies

7. Shell Programming and Scripting

Merge 2 files with one reference columns

Hi All Source1 servername1,patchid1 servername1,patchid2 servername1,patchid3 servername2,patchid1 servername2,patchid2 servername3,patchid4 servername3,patchid5 Source2 servername1,appname1 servername1,appname2 servername1,appname3 servername2,appname1 servername2,appname2... (13 Replies)
Discussion started by: mv_mv
13 Replies

8. Shell Programming and Scripting

Merge records based on multiple columns

Hi, I have a file with 16 columns and out of these 16 columns 14 are key columns, 15 th is order column and 16th column is having information. I need to concate the 16th column based on value of 1-14th column as key in order of 15th column. Here are the example file Input File (multiple... (3 Replies)
Discussion started by: Ravi Agrawal
3 Replies

9. UNIX for Beginners Questions & Answers

Merge multiple columns into one using cat

I will like to merge several files using 'cat', but I observe the output is not consistent. the merge begins at the last line of the first file. file1.txt: 1234 1234 1234 file2.txt: aaaa bbbb cccc dddd cat file1.txt file2.txt > file3.txt file3.txt: 1234 1234 1234aaaa bbbb cccc... (13 Replies)
Discussion started by: geomarine
13 Replies

10. Shell Programming and Scripting

Join and merge multiple files with duplicate key and fill void columns

Join and merge multiple files with duplicate key and fill void columns Hi guys, I have many files that I want to merge: file1.csv: 1|abc 1|def 2|ghi 2|jkl 3|mno 3|pqr file2.csv: (5 Replies)
Discussion started by: yjacknewton
5 Replies
JOIN(1) 						      General Commands Manual							   JOIN(1)

NAME
join - relational database operator SYNOPSIS
join [ options ] file1 file2 DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard input is used. File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in each line. There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con- sists of the common field, then the rest of the line from file1, then the rest of the line from file2. Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis- carded. These options are recognized: -an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2. -e s Replace empty output fields by string s. -jn m Join on the mth field of file n. If n is missing, use the mth field in each file. -o list Each output line comprises the fields specified in list, each element of which has the form n.m, where n is a file number and m is a field number. -tc Use character c as a separator (tab character). Every appearance of c in a line is significant. SEE ALSO
sort(1), comm(1), awk(1) BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort. The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous. 7th Edition April 29, 1985 JOIN(1)
All times are GMT -4. The time now is 09:45 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy