05-17-2014
Is ID=value always the 1st element in the semicolon separated list in the last column on the lines that have gene or protein_coding_gene in the 3rd column, or can it appear later in the list or in an earlier column?
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LEARN ABOUT REDHAT
claqp2
CLAQP2(l) ) CLAQP2(l)
NAME
CLAQP2 - compute a QR factorization with column pivoting of the block A(OFFSET+1:M,1:N)
SYNOPSIS
SUBROUTINE CLAQP2( M, N, OFFSET, A, LDA, JPVT, TAU, VN1, VN2, WORK )
INTEGER LDA, M, N, OFFSET
INTEGER JPVT( * )
REAL VN1( * ), VN2( * )
COMPLEX A( LDA, * ), TAU( * ), WORK( * )
PURPOSE
CLAQP2 computes a QR factorization with column pivoting of the block A(OFFSET+1:M,1:N). The block A(1:OFFSET,1:N) is accordingly pivoted,
but not factorized.
ARGUMENTS
M (input) INTEGER
The number of rows of the matrix A. M >= 0.
N (input) INTEGER
The number of columns of the matrix A. N >= 0.
OFFSET (input) INTEGER
The number of rows of the matrix A that must be pivoted but no factorized. OFFSET >= 0.
A (input/output) COMPLEX array, dimension (LDA,N)
On entry, the M-by-N matrix A. On exit, the upper triangle of block A(OFFSET+1:M,1:N) is the triangular factor obtained; the ele-
ments in block A(OFFSET+1:M,1:N) below the diagonal, together with the array TAU, represent the orthogonal matrix Q as a product of
elementary reflectors. Block A(1:OFFSET,1:N) has been accordingly pivoted, but no factorized.
LDA (input) INTEGER
The leading dimension of the array A. LDA >= max(1,M).
JPVT (input/output) INTEGER array, dimension (N)
On entry, if JPVT(i) .ne. 0, the i-th column of A is permuted to the front of A*P (a leading column); if JPVT(i) = 0, the i-th col-
umn of A is a free column. On exit, if JPVT(i) = k, then the i-th column of A*P was the k-th column of A.
TAU (output) COMPLEX array, dimension (min(M,N))
The scalar factors of the elementary reflectors.
VN1 (input/output) REAL array, dimension (N)
The vector with the partial column norms.
VN2 (input/output) REAL array, dimension (N)
The vector with the exact column norms.
WORK (workspace) COMPLEX array, dimension (N)
FURTHER DETAILS
Based on contributions by
G. Quintana-Orti, Depto. de Informatica, Universidad Jaime I, Spain
X. Sun, Computer Science Dept., Duke University, USA
LAPACK version 3.0 15 June 2000 CLAQP2(l)