I don't know what you mean. Adjusting for your new filenames, the code I suggested becomes:
and produces the output:
which is exactly what you said you wanted.
If you want this output appended to locus_file.txt (which seems very weird), then change the script to:
Hi Friends,
I have to create a new log file everyday and append it with content based on some keywords found in another log file.
Here is what I have tried so far...
grep Error /parentfolder/someLogFile.log >> /parentfolder
/Archive/"testlogfile_error_`date '+%d%m%y'`.txt"
grep error... (6 Replies)
Need help with doing field comparisons.
File1
204.11.23.1 fastmovie.mp4
209.13.1.1 slowmovie.mp4
file 2
NY USA 201.1.1.1 200 freemovie.mp4
CA USA 204.11.23.1 404 notfastmovie.mp4
CA USA 204.11.23.1 200 fastmovie.mp4
basically need to take the first file and find exact matches in... (10 Replies)
Hi All,
I want to remove the rows from File1.csv by comparing the columns/fields in the File2.csv. I only need the records whose first column is same and the second column is different for the same record in both files.Here is an example on what I need.
File1.csv:
RAJAK|ACTIVE|1... (2 Replies)
I have two files
File1 with position (chromosome:start) and individuals as header, where pos is something like 1:2000 and every individual has a value. I have many columns and rows, here an example (tab separated):
pos ind1 ind2 ind3 indn...
1:2000 0 0.1 0.1 1
1:2500 0.99 0.2 0.1 0.2
2:1000... (2 Replies)
Hi All,
I am looking for an awk script to do the following
Join the fields together only if the first 4 fields are same.
Can it be done with join function in awk??
a,b,c,d,8,,,
a,b,c,d,,7,,
a,b,c,d,,,9,
a,b,p,e,8,,,
a.b,p,e,,9,,
a,b,p,z,,,,9
a,b,p,z,,8,,
desired output:
... (1 Reply)
Hi,
I am trying to gather information from the second file and append it to the first file.
input
HWUSI-EAS000_29:1:100:10000:11479#0/1 + chr5 14458050 ATTGGCTGAGGTCCTACTAGTTGTGATGTGTAAGTGT HHHHHHGDGGEDGGGDGCGEDDEFFFAGE 0
second file:... (14 Replies)
I have an input file like this...
All iI want to do is If the lines are identical except for the last field i want to merge them into single line
input_file
I feel something is nothing
I feel something is everything
apple mango banana
apple mango grapes
I want to get output like this:... (3 Replies)
Hi
I have a file as below
<field1> <field2> <field3> ... <field_num1> <field_num2>
Trying to sort based on difference of <field_num1> and <field_num2> in desceding order and print all fields.
I tried this and it doesn't sort on the difference field .. Appreciate your help.
cat... (9 Replies)
Trying to use awk to store the value of $5 in file1 in array x. That array x is then used to search $4 of file1 to find aa match (I use x to skip the header in file1). Since $4 can have multiple strings in it seperated by a , (comma), I split them and iterate througn each split looking for a match.... (2 Replies)
Hi ,
I am having a scenario where I need to split the file based on two field values. The file is a fixed length file.
ex:
AA0998703000000000000190510095350019500010005101980301
K 0998703000000000000190510095351019500020005101480 ... (4 Replies)
Discussion started by: saj
4 Replies
LEARN ABOUT DEBIAN
x2sys_solve
X2SYS_SOLVE(1gmt) Generic Mapping Tools X2SYS_SOLVE(1gmt)NAME
x2sys_solve - Determine systematic corrections from crossovers
SYNOPSIS
x2sys_solve -Ccolumn -TTAG -Emode [ COE_list.d ] [ -V ] [ -W ] [ -Z ] [ -bi[s|S|d|D[ncol]|c[var1/...]] ]
DESCRIPTION
x2sys_solve will use the supplied crossover information to solve for systematic corrections that can then be applied per track to improve
data quality. Several systematic corrections can be solved for using a least-squares approach. Note: Only one data column can be processed
at the time.
-T Specify the x2sys TAG which tracks the attributes of this data type.
-C Specify which data column you want to process. Needed for proper formatting of the output correction table and must match the same
option used in x2sys_list when preparing the input data.
-E The correction type you wish to model. Choose among the following functions f(p), where p are the m parameters per track that we
will fit simultaneously using a least squares approach:
c will fit f(p) = a (a constant offset); records must contain cruise ID1, ID2, COE.
d will fit f(p) = a + b * d (linear drift; d is distance; records must contain cruise ID1, ID2, d1, d2, COE.
g will fit f(p) = a + b sin(y)^2 (1980-1930 gravity correction); records must contain cruise ID1, ID2, latitude y, COE.
h will fit f(p) = a + b cos(H) + c cos(2H) + d sin(H) + e sin(2H) (magnetic heading correction); records must contain cruise ID1,
ID2, heading H, COE.
s will fit f(p) = a * z (a unit scale correction); records must contain cruise ID1, ID2, z1, z2.
t will fit f(p) = a + b * (t - t0) (linear drift; t0 is the start time of the track); records must contain cruise ID1, ID2, t1-t0,
t2-t0, COE.
OPTIONS
No space between the option flag and the associated arguments.
COE_list.d
Name of file with the required crossover columns as produced by x2sys_list. NOTE: If -bi is used then the first two columns are
expected to hold the integer track IDs; otherwise we expect those columns to hold the text string names of the two tracks.
-V Selects verbose mode, which will send progress reports to stderr [Default runs "silently"].
-W Means that each input records has an extra column with the composite weight for each crossover record. These are used to obtain a
weighted least squares solution [no weights].
-Z For -Ed and -Et, determine the earliest time or shortest distance for each track, then use these values as the local origin for time
duration or distance calculations. The local origin is then included in the correction table [Default uses 0].
-bi Selects binary input. Append s for single precision [Default is d (double)]. Uppercase S or D will force byte-swapping. Option-
ally, append ncol, the number of columns in your binary input file if it exceeds the columns needed by the program. Or append c if
the input file is netCDF. Optionally, append var1/var2/... to specify the variables to be read.
EXAMPLES
To fit a simple bias offset to faa for all tracks under the MGD77 tag, try
x2sys_list COE_data.txt -V -TMGD77 -Cfaa -Fnc > faa_coe.txt
x2sys_solve faa_coe.txt -V -TMGD77 -Cfaa -Ec > coe_table.txt
To fit a faa linear drift with time instead, try
x2sys_list COE_data.txt -V -TMGD77 -Cfaa -FnTc > faa_coe.txt
x2sys_solve faa_coe.txt -V -TMGD77 -Cfaa -Et > coe_table.txt
To estimate heading corrections based on magnetic crossovers associated with the tag MGD77 from the file COE_data.txt, try
x2sys_list COE_data.txt -V -TMGD77 -Cmag -Fnhc > mag_coe.txt
x2sys_solve mag_coe.txt -V -TMGD77 -Cmag -Eh > coe_table.txt
To estimate unit scale corrections based on bathymetry crossovers, try
x2sys_list COE_data.txt -V -TMGD77 -Cdepth -Fnz > depth_coe.txt
x2sys_solve depth_coe.txt -V -TMGD77 -Cdepth -Es > coe_table.txt
SEE ALSO x2sys_binlist(1), x2sys_cross(1), x2sys_datalist(1), x2sys_get(1), x2sys_init(1), x2sys_list(1), x2sys_put(1), x2sys_report(1)GMT 4.5.7 15 Jul 2011 X2SYS_SOLVE(1gmt)