My code below is supposed to find which company had the most business and then print the appropriate fields from another file which are the companies ID number and name. I can loop through awk and display all the total amount of business for each company but I need help in only printing out the... (1 Reply)
Hi,
I have this input file called ttbitnres (which is catenated and sorted):-
8 0.4444 213
10 0.5555 342
11 0.5555 321
12 0.5555 231
13 0.4444 400
My code is at :-
#!/bin/bash
echo -e Version "\t" Number of Pass "\t" Number of Fail "\t" Rank Position "\t"Min "\t" Max... (1 Reply)
Hello all,
this should really be easy for you... I need AWK to print column maxima for each column of such input:
Input:
1 2 3 1
2 1 1 3
2 1 1 2
Output should be:
2 2 3 3
This does the sum, but i need max instead:
{ for(i=1; i<=NF; i++)
sum +=$i }
END {for(i=1; i in sum;... (3 Replies)
Hi
I have a list of 2000 records with multiple entries and I want to get the max size for each entry
ABC 1
ABC 2
ABC 3
ABC 4
DEF 1
DEF 2
DEF 2
DEF 2
DEF 2
... (9 Replies)
Hi,
I have files named as
energy.dat.1
energy.dat.2
energy.dat.3
...
energy.dat.2342
I would like to find the file with maximum number in the filename (ex. energy.dat.2342) and open it.
Would you please share your expertize in writing the script?
Thanks in advance. (8 Replies)
I do have a tab delimited file of the following format
a_1 rt
a_1 st_2
a_1 st_3
a_2 bt_2
a_2 st_er
b_2 st_2
b_2 st_32
S_1 rt_8
S_1 rt_64
I want to cut short the above file and group the file based on the first column like below.
a_1 rt st_2 st_3
a_2 bt_2 st_er
b_2 st_2... (1 Reply)
Hi,
I need an awk script (or whatever shell-construct) that would take data like below and get the max value of 3 column, when grouping by the 1st column.
clientname,day-of-month,max-users
-----------------------------------
client1,20120610,5
client2,20120610,2
client3,20120610,7... (3 Replies)
I've the following data set. I would like to look at the column 3 and only use the rows which has the max value for column 3
Can we use the awk or sed to achieve it.
10 2 10 100
11 2 20 100
12 2 30 100
13 2 30 100
14 ... (7 Replies)
Hi All,
need help...
I have some log below : ### {"request_id":"e8395eb0-a8bd-11e9-b77b-d507ea5312aa","message":"when inquiry paybill 628524871 prevalidation cause : Invalid Transaction"}
### {"request_id":"043f2310-a8be-11e9-b57b-f9c7344998d7","message":"when inquiry paybill 62821615... (2 Replies)
Discussion started by: fajar_3t3
2 Replies
LEARN ABOUT DEBIAN
re-pcr
RE-PCR(1) General Commands Manual RE-PCR(1)NAME
re-PCR -- Find sequence tagged sites (STS) in DNA sequences
SYNOPSIS
re-PCR [-hV] -p hash-file [-g gaps] [-n mism] [-lq] [primer ...]
re-PCR [-hV] -P hash-file [-g gaps] [-n mism] [-l] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [primers-file ...]
re-PCR [-hV] -s hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-o outfile] [-r+|-] [left right lo[-hi] [...]]
re-PCR [-hV] -S hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [stsfile ...]
DESCRIPTION
Implements reverse searching (called Reverse e-PCR) to make it feasible to search the human genome sequence and other large genomes by per-
forming STS and primer searches.
OPTIONS -p=hash-file
Perform primer lookup using hash-file
-P=hash-file
Perform primer lookup using hash-file
-s=hash-file
Perform STS lookup using hash-file
-S=hash-file
Perform STS lookup using hash-file
-n=mism Set max allowed mismatches per primer for lookup
-g=gaps Set max allowed indels per primer for lookup
-m=margin Set variability for STS size for lookup
-l Use presize alignments (only if gaps>0)
-G Print alignments in comments
-d=min-max
Set default STS size
-r=+|- Enable/disable reverse STS lookup
-O=+|- Enable/disable syscall optimisation
-C=batchcnt
Set number of STSes per batch
-o=outfile
Set output file name
-q Quiet (no progress indicator)
EXAMPLE
famap -tN -b genome.famap org/chr_*.fa
fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap
re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200
See famap(1) and fahash(1)SEE ALSO
/usr/share/doc/ncbi-epcr/README.txt
bioperl(1), e-pcr(1), famap(1) and fahash(1)AUTHORS
This manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others). Permission is granted
to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by
the Free Software Foundation.
On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.
April 2008 RE-PCR(1)