01-28-2014
So whats the content of hg19_refGene.txt - the file within grep is looking for a string "panel_genes.txt".
Also, you're uploading a 'result file' (match.txt) that is alot larger than what you call an input file (panel_genes.txt).
Also, even if i misunderstand the grep command, the result would overwrite the 'more-detailed-looking' match.txt file with a 'row of single strings' compared to its current content.
Phew, translating is hard at times.
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LEARN ABOUT DEBIAN
text::worddiff::html
Text::WordDiff::HTML(3pm) User Contributed Perl Documentation Text::WordDiff::HTML(3pm)
Name
Text::WordDiff::HTML - XHTML formatting for Text::WordDiff
Synopsis
use Text::WordDiff;
my $diff = word_diff 'file1.txt', 'file2.txt'; { STYLE => 'HTML' };
my $diff = word_diff $string1, $string2, { STYLE => 'HTML' };
my $diff = word_diff *FH1, *FH2, { STYLE => 'HTML' };
my $diff = word_diff &reader1, &reader2, { STYLE => 'HTML' };
my $diff = word_diff @records1, @records2, { STYLE => 'HTML' };
# May also mix input types:
my $diff = word_diff @records1, 'file_B.txt', { STYLE => 'HTML' };
Description
This class subclasses Text::WordDiff::Base to provide a XHTML formatting for Text::WordDiff. See Term::WordDiff for usage details. This
class should never be used directly.
Text::WordDiff::HTML formats word diffs for viewing in a Web browser. The diff content is highlighted as follows:
o "<div class="file">"
This element contains the entire contents of the diff "file" returned by "word_diff()". All of the following elements are subsumed by
this one.
o "<span class="fileheader">"
The header section for the files being "diff"ed, usually something like:
--- in.txt Thu Sep 1 12:51:03 2005
+++ out.txt Thu Sep 1 12:52:12 2005
This element immediately follows the opening "file" "<div>" element, but will not be present if Text::WordDif cannot deterimine the
file names for both files being compared.
o "<span class="hunk">"
This element contains a single diff "hunk". Each hunk may contain the following elements:
o "<ins>"
Inserted content.
o "<del>"
Deleted content.
You may do whatever you like with these elements and classes; I highly recommend that you style them using CSS. You'll find an example CSS
file in the eg directory in the Text-WordDiff distribution.
See Also
Text::WordDiff
Text::WordDiff::ANSIColor
Support
This module is stored in an open repository at the following address:
<https://svn.kineticode.com/Text-WordDiff/trunk/>
Patches against Text::WordDiff are welcome. Please send bug reports to <bug-text-worddiff@rt.cpan.org>.
Author
David Wheeler <david@kineticode.com>
Copyright and License
Copyright (c) 2005-2008 David Wheeler. Some Rights Reserved.
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.10.0 2009-09-24 Text::WordDiff::HTML(3pm)