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Top Forums Shell Programming and Scripting Grepping one file column from another file Post 302881078 by newbie83 on Thursday 26th of December 2013 12:16:53 PM
Old 12-26-2013
Grepping one file column from another file

Hi all,

I want to search the second col of a file as a sub-part of 4th col of another file and produce a joint output. In the example, search if B is contained as a sub-part in E:B:C (sub-parts separated by colons). Note the second row is not found doesnt find a match as F isnt there in col 4 second file (second line).

Code:
file1

A B
E F
G H

file2
C D L E:B:C  
Z Y F FFFF:EEE:PP
G H R H:H:I:J

out

A B C D L E:B:C  
E F
G H G H R H:H:I:J

Here is what I tried but doesn't work

Code:
awk ' NR == FNR { y[":"$2":"] next  }{ x = ":"$4":" for (i in y)  if (index(x,i)) print i, $0 } file1 file2

 

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PASTE(1)						      General Commands Manual							  PASTE(1)

NAME
paste - paste multiple files together SYNOPSIS
paste [-s] [-d list] file... OPTIONS
-d Set delimiter used to separate columns to list. -s Print files sequentially, file k on line k. EXAMPLES
paste file1 file2 # Print file1 in col 1, file2 in col 2 paste -s f1 f2 # Print f1 on line 1 and f2 on line 2 paste -d : file1 file2 # Print the lines separated by a colon DESCRIPTION
Paste concatenates corresponding lines of the given input files and writes them to standard output. The lines of the different files are separated by the delimiters given with the option -s. If no list is given, a tab is substituted for every linefeed, except the last one. If end-of-file is hit on an input file, subsequent lines are empty. Suppose a set of k files each has one word per line. Then the paste output will have k columns, with the contents of file j in column j. If the -s flag is given, then the first file is on line 1, the second file on line 2, etc. In effect, -s turns the output sideways. If a list of delimiters is given, they are used in turn. The C escape sequences , , \, and are used for linefeed, tab, backslash, and the null string, respectively. PASTE(1)
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