Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: Question regarding Bash program
Top Forums Programming Question regarding Bash program Post 302860403 by sea on Saturday 5th of October 2013 11:15:46 PM
Old 10-06-2013
You've passed hardcoded text, rather than the variable $f..
Code:
load /server/John/Docking-Studies/docking-FC996-analog/MR1004/test/Frog-mol-ryan_*/out_Frog-ryan-mol_ligand_*.pdbqt

becomes
Code:
load /server/John/Docking-Studies/Insilico-mod-FC996/docking-FC996-analog/MR1004/test/$f/out_$f*.pdbqt

Assuming the "out_Frog_ryan_mol" was a typo and should have been "out_Frog_mol_ryan"...

Hope this helps
Last edited by Don Cragun; 10-06-2013 at 03:17 AM.. Reason: Change ICODE tags to CODE tags for pathnames that should not be split into multiple lines
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

BASH: how to launch a program with parameters

Hi, I'm a pretty big fan of BASH scripting. I've got a bunch I use for random things and lately a couple issues have been plaguing me. Both are somewhat related, in that they deal with filenames with spaces and "escaped" characters and with launching a program with command line arguements... (5 Replies)
Discussion started by: TinCanFury
5 Replies

2. Shell Programming and Scripting

[bash] Run a program many times

Hi I'm running a program many times with differents input. I mean that i run my_prog with some parameters and i wait till the end, then i start again another simulations with some others differents parameters. Is possible to make it automatic with a script bash. Maybe i need some... (2 Replies)
Discussion started by: Dedalus
2 Replies

3. Shell Programming and Scripting

PROGRAM BASH

Hola tengo que hacer un programa en Bash, necesito ayuda porque no me sale y llevo bastante tiempo con esto!! Los cinco directorios que más ocupan, ordenados según tamaño. Para medir el tamaño de cada directorio no debe incluirse el tamaño de sus subdirectorios. Los diez archivos normales que más... (1 Reply)
Discussion started by: danihj
1 Replies

4. Shell Programming and Scripting

Program Bash VERY URGENT

Hello I have to do a program in Bash, need help because it does not go out for me and go enough time with this!! Five directories(boards of directors) that more occupy, arranged according to size. To measure the size of every directory(board of directors) there must not be included the size... (1 Reply)
Discussion started by: danihj
1 Replies

5. Shell Programming and Scripting

Display output bash program

Hello, i have a problem with the output from my bash program. I made this program #!/bin/bash BESTANDEN=$* # Plaatst bestanden in de variabele BESTANDEN TMPFILE=xmlprog.sh.$$.$RANDOM # basisnaam voor tijdelijke bestanden # controller of het programma correct is aangeroepen if then ... (6 Replies)
Discussion started by: dutchspiders
6 Replies

6. Shell Programming and Scripting

Creating Printing Program in bash

HI I am trying to create a bash script to print whatever i type in It has to have these below to define the size of the label and what size to print the text N q609 A100,10,0,5,2,2,N," " P1 It has to be sent to below > /dev/usblp0 So what it has to be is Written... (12 Replies)
Discussion started by: bganse
12 Replies

7. Programming

Putting bash script in C program

suppose i have a bash script: #!/bin/bash echo "hello" echo "how are you" echo "today" how can i put the entire script above into a basic c program? i do not want to translate the bash code to a c code. i want C to run the bash code. is this possible? i found this on the... (15 Replies)
Discussion started by: SkySmart
15 Replies

8. UNIX for Dummies Questions & Answers

Kill a program from bash

to kill a program in bash, for instance 'mousepad' I use kill $(pidof mousepad); or pkill mousepad But it only works if we use another bash window; If it is started from the same bash, that does not work: #mousepad;kill $(pidof mousepad); In this case, it looks like mousepad hangs... (7 Replies)
Discussion started by: arpagon
7 Replies

9. Shell Programming and Scripting

Question regarding whence program

Hi all, In production code, if using the whence command it picks the production file.if I am using the test code file. by using whence command it not picking the file. do you have any idea on this. Whence prodcode it picks the exact path of the prodcode. whence testcode. it... (1 Reply)
Discussion started by: ramkumar15
1 Replies

10. Homework & Coursework Questions

Bash Scripting program

#! /bin/bash # program to creat a backup copy for every deleted file or dierctores mv -t /home/$USER/.local/share/Trash/files $1 rsync -a /home/$USER/.local/share/Trash/files /usr/share/trash didn't work (2 Replies)
Discussion started by: rami-ali
2 Replies

LEARN ABOUT OSX

locale::codes::langfam

Locale::Codes::LangFam(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangFam(3pm)

NAME

       Locale::Codes::LangFam - standard codes for language extension identification

SYNOPSIS

	  use Locale::Codes::LangFam;

	  $lext = code2langfam('apa');		       # $lext gets 'Apache languages'
	  $code = langfam2code('Apache languages');    # $code gets 'apa'

	  @codes   = all_langfam_codes();
	  @names   = all_langfam_names();

DESCRIPTION

       The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in
       ISO 639-5.

       Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5
       language family codes will be used.

SUPPORTED CODE SETS

       There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a
       constant that is automatically exported by this module.

       For example, the two are equivalent:

	  $lext = code2langfam('apa','alpha');
	  $lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA);

       The codesets currently supported are:

       alpha
	   This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages.

	   This is the default code set.

ROUTINES

       code2langfam ( CODE [,CODESET] )
       langfam2code ( NAME [,CODESET] )
       langfam_code2code ( CODE ,CODESET ,CODESET2 )
       all_langfam_codes ( [CODESET] )
       all_langfam_names ( [CODESET] )
       Locale::Codes::LangFam::rename_langfam  ( CODE ,NEW_NAME [,CODESET] )
       Locale::Codes::LangFam::add_langfam  ( CODE ,NAME [,CODESET] )
       Locale::Codes::LangFam::delete_langfam  ( CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_alias  ( NAME ,NEW_NAME )
       Locale::Codes::LangFam::delete_langfam_alias  ( NAME )
       Locale::Codes::LangFam::rename_langfam_code  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_code_alias  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::delete_langfam_code_alias  ( CODE [,CODESET] )
	   These routines are all documented in the Locale::Codes::API man page.

SEE ALSO

       Locale::Codes
	   The Locale-Codes distribution.

       Locale::Codes::API
	   The list of functions supported by this module.

       http://www.loc.gov/standards/iso639-5/id.php
	   ISO 639-5 .

AUTHOR

       See Locale::Codes for full author history.

       Currently maintained by Sullivan Beck (sbeck@cpan.org).

COPYRIGHT

	  Copyright (c) 2011-2012 Sullivan Beck

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

perl v5.16.2							    2012-10-11					       Locale::Codes::LangFam(3pm)
All times are GMT -4. The time now is 10:24 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy