Sponsored Content
Top Forums Shell Programming and Scripting Extract sequences of bytes from binary for differents blocks Post 302846725 by Ophiuchus on Sunday 25th of August 2013 01:47:06 PM
Old 08-25-2013
Yes, only I don't know why is no printing each of the 14 bytes separated by "|".
Only the fisrt 2 bytes after 0x0e are printing separated.
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Remove first N bytes and last N bytes from a binary file on AIX.

Hi all, Does anybody know or guide me on how to remove the first N bytes and the last N bytes from a binary file? Is there any AWK or SED or any command that I can use to achieve this? Your help is greatly appreciated!! Best Regards, Naveen. (1 Reply)
Discussion started by: naveendronavall
1 Replies

2. UNIX for Advanced & Expert Users

Deal with binary sequences

Hello, I have come across the necessity for me to deal with binary sequences and I had a few questions. 1- Does any UNIX scripting language provide any tool or command for converting text data to binary sequences? Example of binary sequence: "0x97 0x93 0x85 0x40 0xd5 0xd6 0xd7" 2- If I want... (2 Replies)
Discussion started by: Indalecio
2 Replies

3. Shell Programming and Scripting

Extract sequence blocks

Hi, I have an one-line file consisting of a sequence of 660 letters. I would like to extract 9-letter blocks iteratively: ASDFGHJKLQWERTYUIOPZXCVBNM first block: ASDFGHJKL 1nd block: SDFGHJKLQ What I have so far only gives me the first block, can anyone please explain why? cat... (7 Replies)
Discussion started by: solli
7 Replies

4. Shell Programming and Scripting

extract blocks of text from a file

Hi, This is part of a large text file I need to separate out. I'd like some help to build a shell script that will extract the text between sets of dashed lines, write that to a new file using the whole or part of the first text string as the new file name, then move on to the next one and... (7 Replies)
Discussion started by: cajunfries
7 Replies

5. Linux

Why does ext3 allocate 8 blocks for files that are few bytes long

The title is clear: why does ext3 allocate 8 blocks for files that are few bytes long? If I create a file named "test", put a few chars in it, and then I run: stat test I get that "Blocks: 8" I searched in the web and found that ext does that, it allocates 8 blocks even if It doesn't need... (4 Replies)
Discussion started by: Tavo
4 Replies

6. UNIX for Dummies Questions & Answers

X bytes of 0, Y bytes of random data, Z bytes of 5, T bytes of 1. ??

Hello guys. I really hope someone will help me with this one.. So, I have to write this script who: - creates a file home/student/vmdisk of 10 mb - formats that file to ext3 - mounts that partition to /mnt/partition - creates a file /mnt/partition/data. In this file, there will... (1 Reply)
Discussion started by: razolo13
1 Replies

7. Shell Programming and Scripting

Extract sequences based on the list

Hi, I have a file with more than 28000 records and it looks like below.. >mm10_refflat_ABCD range=chr1:1234567-2345678 tgtgcacactacacatgactagtacatgactagac....so on >mm10_refflat_BCD range=chr1:3234567-4545678... tgtgcacactacacatgactagtatgtgcacactacacatgactagta . . . . . so on ... (2 Replies)
Discussion started by: Diya123
2 Replies

8. Shell Programming and Scripting

Extract length wise sequences from fastq file

I have a fastq file from small RNA sequencing with sequence lengths between 15 - 30. I wanted to filter sequence lengths between 21-25 and write to another fastq file. how can i do that? (4 Replies)
Discussion started by: empyrean
4 Replies

9. Shell Programming and Scripting

Extract the part of sequences from a file

I have a text file, input.fasta contains some protein sequences. input.fasta is shown below. >P02649 MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQT LSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQA RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY... (8 Replies)
Discussion started by: rahim42
8 Replies

10. Shell Programming and Scripting

Blocks of text in a file - extract when matches...

I sat down yesterday to write this script and have just realised that my methodology is broken........ In essense I have..... ----------------------------------------------------------------- (This line really is in the file) Service ID: 12345 ... (7 Replies)
Discussion started by: Bashingaway
7 Replies
UUENCODE(5)							File Formats Manual						       UUENCODE(5)

NAME
uuencode - format of an encoded uuencode file DESCRIPTION
Files output by uuencode(1) consist of a header line, followed by a number of body lines, and a trailer line. The uudecode(1) command will ignore any lines preceding the header or following the trailer. Lines preceding a header must not, of course, look like a header. The header line is distinguished by having the first 6 characters begin The word begin is followed by a mode (in octal), and a string which names the remote file. A space separates the three items in the header line. The body consists of a number of lines, each at most 62 characters long (including the trailing newline). These consist of a character count, followed by encoded characters, followed by a newline. The character count is a single printing character, and represents an inte- ger, the number of bytes the rest of the line represents. Such integers are always in the range from 0 to 63 and can be determined by sub- tracting the character space (octal 40) from the character. Groups of 3 bytes are stored in 4 characters, 6 bits per character. All are offset by a space to make the characters printing. The last line may be shorter than the normal 45 bytes. If the size is not a multiple of 3, this fact can be determined by the value of the count on the last line. Extra garbage will be included to make the character count a multiple of 4. The body is terminated by a line with a count of zero. This line consists of one ASCII space. The trailer line consists of end on a line by itself. SEE ALSO
uuencode(1), uudecode(1), uusend(1), uucp(1), mail(1) HISTORY
The uuencode file format appeared in BSD 4.0 . UUENCODE(5)
All times are GMT -4. The time now is 10:38 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy