I've tested the program using as input the attached file of 20MB on cygwin and compiled on windows too ran from DOS.
In cygwin I got the segmentation error and compiled in Windows the script process data but stops suddenly. It processes 2550 lines
and the last line repeats the values of subblocks many times. When stops the maximun file size of the ouput is 231Kb.
One more question, is possible to print the values in the moment that is analyzed by the program? because it seems is storing in buffer the
data that will be printed and prints at the end and for a big file it could be problems.
I hope you can see why this happens.
PD: For the attached bin20MB, the line:
Should be modified to:
Thanks so much again!
Hi all,
Does anybody know or guide me on how to remove the first N bytes and the last N bytes from a binary file? Is there any AWK or SED or any command that I can use to achieve this?
Your help is greatly appreciated!!
Best Regards,
Naveen. (1 Reply)
Hello,
I have come across the necessity for me to deal with binary sequences and I had a few questions.
1- Does any UNIX scripting language provide any tool or command for converting text data to binary sequences? Example of binary sequence: "0x97 0x93 0x85 0x40 0xd5 0xd6 0xd7"
2- If I want... (2 Replies)
Hi,
I have an one-line file consisting of a sequence of 660 letters. I would like to extract 9-letter blocks iteratively:
ASDFGHJKLQWERTYUIOPZXCVBNM
first block: ASDFGHJKL
1nd block: SDFGHJKLQ
What I have so far only gives me the first block, can anyone please explain why?
cat... (7 Replies)
Hi,
This is part of a large text file I need to separate out.
I'd like some help to build a shell script that will extract the text between sets of dashed lines, write that to a new file using the whole or part of the first text string as the new file name, then move on to the next one and... (7 Replies)
The title is clear: why does ext3 allocate 8 blocks for files that are few bytes long?
If I create a file named "test", put a few chars in it, and then I run:
stat test
I get that "Blocks: 8"
I searched in the web and found that ext does that, it allocates 8 blocks even if It doesn't need... (4 Replies)
Hello guys. I really hope someone will help me with this one..
So, I have to write this script who:
- creates a file home/student/vmdisk of 10 mb
- formats that file to ext3
- mounts that partition to /mnt/partition
- creates a file /mnt/partition/data. In this file, there will... (1 Reply)
Hi,
I have a file with more than 28000 records and it looks like below..
>mm10_refflat_ABCD range=chr1:1234567-2345678
tgtgcacactacacatgactagtacatgactagac....so on
>mm10_refflat_BCD range=chr1:3234567-4545678...
tgtgcacactacacatgactagtatgtgcacactacacatgactagta
.
.
.
.
.
so on
... (2 Replies)
I have a fastq file from small RNA sequencing with sequence lengths between 15 - 30. I wanted to filter sequence lengths between 21-25 and write to another fastq file. how can i do that? (4 Replies)
I have a text file, input.fasta contains some protein sequences. input.fasta is shown below.
>P02649
MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQT
LSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQA
RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY... (8 Replies)
I sat down yesterday to write this script and have just realised that my methodology is broken........
In essense I have.....
----------------------------------------------------------------- (This line really is in the file)
Service ID: 12345 ... (7 Replies)
Discussion started by: Bashingaway
7 Replies
LEARN ABOUT SUNOS
wnn_cvt_xim_tbl
wnn_cvt_xim_tbl(4) File Formats wnn_cvt_xim_tbl(4)NAME
wnn_cvt_xim_tbl - Key conversion table for xjsi
SYNOPSIS
/usr/lib/locale/ja/wnn/cvt_xim_tbl
DESCRIPTION
cvt_xim_tbl defines the conversion table for keyboard input and key code.xjsi(1) converts keyboard input (KeySym) to code (Wnn_code) by
using of cvt_key_tbl.
SYNTAX
State-or-KeySym Wnn_code
State-or-KeySym = [States]KeySym-name
States = State-name | [SState-or-KeySym and Wnn_code must be separated with a space character or tab. Lines beginning with a semicolon (;)
are comments.
CODE DESCRIPTION
Octal number 0??
Decimal number ??
Hexadecimal number 0x?? or 0X??
EXAMPLES
Example 1:
Meta|Left 0x9A
Meta|Up 0x99
Meta|F11 0x95
Meta|minus 0x81
Meta|asciicircum 0x82
Kanji 0x81
F1 0x91
F2 0x90
Meta|Shift|F1 0x91
SEE ALSO xjsi(1), uumkey(4), wnn_2A_CTRL(4)NOTES
Code converted by cvt_xim_tbl is evaluated by the Automaton table 2A_CTRL (default) and then by uumkey.
SunOS 5.10 10 Jan 2003 wnn_cvt_xim_tbl(4)