Hi all,
I have difficulty to solve the followign problem.
mydata:
StartPoint EndPoint
22 55
2222 2230
33 66
44 58
222 240
11 25
22 60
33 45
The union of above... (2 Replies)
Dear Gurus,
I have 57 tab-delimited different text files, each one containing entries in 3 columns. The first column in each file contains names of objects. Some names are present in more than one file. I would like to find those names and store them in a separate text file, preferably with a... (6 Replies)
Hi, I have a file1 of many long sequences, each preceded by a unique header line. file2 is 3-columns list: headers name, start position, end position. I'd like to extract the sequence region of file1 specified in file2.
Based on a post elsewhere, I found the code:
awk... (2 Replies)
Discussion started by: pathunkathunk
2 Replies
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The forums have been seeing a sharp increase in spam bots, forum robots, and malicious registrations from certain countries. If you have been directed to this thread due to a "No Permission Error" when trying to register please post in this thread and request permission to register, including... (1 Reply)
Hi I have 2 files; usually the end position in the file1 is the start position in the file2 and the end position in file2 will be the start position in file1 (flanks)
file1
Id start end
aaa1 0 3000070
aaa1 3095270 3095341
aaa1 3100822 3100894
aaa1 ... (1 Reply)
Hello, here I am posting my query again with modified data input files.
see my query is :
i have two input files file1 and file2.
file1 is smalldata.fasta
>gi|546671471|gb|AWWX01449637.1| Bubalus bubalis breed Mediterranean WGS:AWWX01:contig449636, whole genome shotgun sequence... (20 Replies)
Hi,
I have been trying to retrieve the names of files present in a directory one by one but the names of files are getting overlapped on one another.
I tried the below command.
ls -1 > filename
please help me in getting the file names line by line without overlapping. I am using korn... (6 Replies)
Hi all,
I have a file like this I want to extract only those regions which are big and continous
chr1 3280000 3440000
chr1 3440000 3920000
chr1 3600000 3920000 # region coming within the 3440000 3920000. so i don't want it to be printed in output
chr1 3920000 4800000
chr1 ... (2 Replies)
Discussion started by: amrutha_sastry
2 Replies
LEARN ABOUT PHP
limititerator
LIMITITERATOR(3) 1 LIMITITERATOR(3)The LimitIterator classINTRODUCTION
The LimitIterator class allows iteration over a limited subset of items in an Iterator.
CLASS SYNOPSIS
LimitIterator
LimitIteratorextends
IteratorIteratorOuterIterator
Methods
o public LimitIterator::__construct (Iterator $iterator, [int $offset], [int $count = -1])
o public mixed LimitIterator::current (void )
o public Iterator LimitIterator::getInnerIterator (void )
o public int LimitIterator::getPosition (void )
o public mixed LimitIterator::key (void )
o public void LimitIterator::next (void )
o public void LimitIterator::rewind (void )
o public int LimitIterator::seek (int $position)
o public bool LimitIterator::valid (void )
EXAMPLES
Example #1
LimitIterator usage example
<?php
// Create an iterator to be limited
$fruits = new ArrayIterator(array(
'apple',
'banana',
'cherry',
'damson',
'elderberry'
));
// Loop over first three fruits only
foreach (new LimitIterator($fruits, 0, 3) as $fruit) {
var_dump($fruit);
}
echo "
";
// Loop from third fruit until the end
// Note: offset starts from zero for apple
foreach (new LimitIterator($fruits, 2) as $fruit) {
var_dump($fruit);
}
?>
The above example will output:
string(5) "apple"
string(6) "banana"
string(6) "cherry"
string(6) "cherry"
string(6) "damson"
string(10) "elderberry"
PHP Documentation Group LIMITITERATOR(3)