I would like to remove characters from column 7 so that from an input file looking like this:
>HWI-EAS422_12:4:1:69:89 GGTTTAAATATTGCACAAAAGGTATAGAGCGT U0 1 0 0 ref_chr8.fa 6527777 F DD
I get something like that in an output file:
... (13 Replies)
How can i break a text file into parts that occur between a specific pattern?
I have text file having various xml many tags like which starts with the tag "<?xml version="1.0" encoding="utf-8"?>" . I have to break the whole file into several xmls by looking for the above pattern.
All the... (9 Replies)
hye there...
i have a problem to copy file in specific folder
that will change the name according to
host,time(%m%s) and date(%Y%M%D)
example folder name:
host_20100531.154101801
this folder name will always change...
but i just want to copy the AAA.txt and BBB.txt file..
really need... (17 Replies)
Hello. I need help with copying part of a file structure to another directory while still keeping the structure. For example look below:
../folder1/sub1/txt.txt
../folder1/sub2/pic.png
../folder2/sub1/pic.png
../folder2/sub2/txt.txt
So in this I would like to copy only the directories and... (3 Replies)
There are some files in a directory like a.tx~ , b.txt~,c.txt~.
I want to delete all these files inside that directory and sub directory.
How can i do this?
#!/bin/bash
cd thatdirectory
......
rm -rf *~
...... (7 Replies)
i have a txt file of image names that have to be deleted in pwd how can i use the txt file to delete the files in pwd and is it possible?--i might be able to import the txt files into a spreadsheet ahd same it as a csv file. i want it to be done recursive lly --what i mean is teh sysem goes thru... (4 Replies)
Hi,
I`m a total newbie, well my requirement is that i have 2 files
I want to identify which countries i do not currently have in db..
how can i use the grep or another command to find this file ..
i want to match all-countries.txt with countries-in-db.txt so the output is equal to... (11 Replies)
hi,
I need a help. I used this command to list all the log files which are for more than 10 days to a text file.
find /usr/script_test -type f -mtime +10>>/usr/ftprm.txt
I want all these files listed in the ftprm.txt to be ftp in another machine and then rm the files.
Anyone can help me... (8 Replies)
I have created few text file during run time by redirecting the txt file
echo USER_LIST_"$(date '+%d%h%Y')".csv > report_location.txt
report_location.txt is creating in the same location where I run script
home/script
When I try to remove the txt file at the end of the... (3 Replies)
Hi, I have very old files in my server like from 2012 and i want to delete them,
Please help.
Thanks in advance.. (2 Replies)
Discussion started by: nanz143
2 Replies
LEARN ABOUT DEBIAN
sysprofile
SYSPROFILE(8) System Manager's Manual SYSPROFILE(8)NAME
sysprofile - modular centralized shell configuration
DESCRIPTION
sysprofile is a generic approach to configure shell settings in a modular and centralized way mostly aimed at avoiding work for lazy sysad-
mins. It has only been tested to work with the bash shell.
It basically consists of the small /etc/sysprofile shell script which invokes other small shell scripts having a .bash suffix which are
contained in the /etc/sysprofile.d/ directory. The system administrator can drop in any script he wants without any naming convention
other than that the scripts need to have a .bash suffix to enable automagic sourcing by /etc/sysprofile.
This mechanism is set up by inserting a small shell routine into /etc/profile for login shells and optionally into /etc/bashrc and/or
/etc/bash.bashrc for non-login shells from where the actual /etc/sysprofile script is invoked:
if [ -f /etc/sysprofile ]; then
. /etc/sysprofile
fi
For using "sysprofile" under X11, one can source it in a similar way from /etc/X11/Xsession or your X display manager's Xsession file to
provide the same shell environment as under the console in X11. See the example files in /usr/share/doc/sysprofile/ for illustration.
For usage of terminal emulators with a non-login bash shell under X11, take care to enable sysprofile via /etc/bash.bashrc. If not set
this way, your terminal emulators won't come up with the environment defined by the scripts in /etc/sysprofile.d/.
Users not wanting /etc/sysprofile to be sourced for their environment can easily disable it's automatic mechanism. It can be disabled by
simply creating an empty file called $HOME/.nosysprofile in the user's home directory using e.g. the touch(1) command.
Any single configuration file in /etc/sysprofile.d/ can be overridden by any user by creating a private $HOME/.sysprofile.d/ directory
which may contain a user's own version of any configuration file to be sourced instead of the system default. It's names have just to
match exactly the system's default /etc/sysprofile.d/ configuration files. Empty versions of these files contained in the $HOME/.syspro-
file.d/ directory automatically disable sourcing of the system wide version.
Naturally, users can add and include their own private script inventions to be automagically executed by /etc/sysprofile at login time.
OPTIONS
There are no options other than those dictated by shell conventions. Anything is defined within the configuration scripts themselves.
SEE ALSO
The README files and configuration examples contained in /etc/sysprofile.d/ and the manual pages bash(1), xdm(1x), xdm.options(5), and
wdm(1x). Recommended further reading is everything related with shell programming.
If you need a similar mechanism for executing code at logout time check out the related package syslogout(8) which is a very close compan-
ion to sysprofile.
BUGS
sysprofile in its current form is mainly restricted to bash(1) syntax. In fact it is actually a rather embarrassing quick and dirty hack
than anything else - but it works. It serves the practical need to enable a centralized bash configuration until something better
becomes available. Your constructive criticism in making this into something better" is very welcome. Before i forget to mention it: we
take patches... ;-)
AUTHOR
sysprofile was developed by Paul Seelig <pseelig@debian.org> specifically for the Debian GNU/Linux system. Feel free to port it to and use
it anywhere else under the conditions of either the GNU public license or the BSD license or both. Better yet, please help to make it into
something more worthwhile than it currently is.
SYSPROFILE(8)