Sponsored Content
Full Discussion: Help in awk/bash
Top Forums Shell Programming and Scripting Help in awk/bash Post 302754343 by Don Cragun on Thursday 10th of January 2013 12:47:25 PM
Old 01-10-2013
Quote:
Originally Posted by bioinfo
Thanks.
Its working. I modified the way of printing and got the required output. Smilie
Great.

Have you figured out how to use awk, sed, or the shell to extract entries listed in 2.txt from the output you just produced?
This User Gave Thanks to Don Cragun For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

BASH with AWK

Hello, I have a file.txt with 20000 lines and 2 columns each which consists of current_filename and new_filename . I want to create a script to find files in a directory with current_filename and move it to new folder with new_filename. Could you please help me how to do that?? ... (2 Replies)
Discussion started by: narasimhulu
2 Replies

2. Shell Programming and Scripting

Is there any better way for sorting in bash/awk

Hi, I have a file which is:- 1 6 4 8 2 3 2 1 9 3 2 1 3 3 5 6 3 1 4 9 7 8 2 3 I would like to sort from field $2 to field $6 for each of the line to:- 1 2 3 4 6 8 2 1 1 2 3 9 3 1 3 3 5 6 4 2 3 7 8 9 I came across this Arrays on example 26-6. But it is much complicated. I am... (7 Replies)
Discussion started by: ahjiefreak
7 Replies

3. Shell Programming and Scripting

awk bash help

Hi, I'm trying to read a file containing lines with spaces in them. The inputfile looks like this ------------------------------ Command1 arg1 arg2 Command2 arg5 arg6 arg7 ------------------------------- The shell code looks like this... lines=`awk '{ print }' inputfile` ... (2 Replies)
Discussion started by: a-gopal
2 Replies

4. Shell Programming and Scripting

scripting help with bash and awk

I'm trying to reformat some tide information into a useable format and failing. Input file is.... 4452 CHENNAI (MADRAS) 13°06'N, 80°18'E India East Coast 01 June 2009 UT(GMT) Data Area 3. Indian Ocean (northern part) and Red Sea to Singapore 01/06/2009 00:00 0.7 m 00:20 0.7 m 00:40... (3 Replies)
Discussion started by: garethsays
3 Replies

5. UNIX for Dummies Questions & Answers

Help with BASH/AWK queries ....

Hi Everyone, I have an input file in the following format: score.file1.txt contig00045 length=566 numreads=19 1047 0.0 contig00055 length=524 numreads=7 793 0.0 contig00052 length=535 numreads=10 607 e-176 contig00072 length=472 numreads=46 571 e-165... (8 Replies)
Discussion started by: Fahmida
8 Replies

6. Shell Programming and Scripting

AWK/Bash script

I would like to write a script to extend this command to a general case: BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)} i.e. so that BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)} BEGIN {s_1=0;n_1=0}{n_1++;s_1+=($51-$2)^2}END {print... (3 Replies)
Discussion started by: chrisjorg
3 Replies

7. UNIX for Dummies Questions & Answers

Help in awk/bash

Hi, I am also a newbie in awk and trying to find solution of my problem. I have one reference file 1.txt with 2 columns and I want to search other 10 files (a.txt, b.txt......h.txt each with 5 columns) corresponding to the values of 2nd column from 1.txt. If the value from 2nd column from 1.txt... (0 Replies)
Discussion started by: bioinfo
0 Replies

8. Shell Programming and Scripting

Help in awk/bash

Hi, I have two files: atom.txt and g.txt atom.txt has multiple patterns but I am showing only two patterns each ending with ENDMDL: ATOM 1 N SER A 1 35.092 83.194 140.076 1.00 0.00 N ATOM 2 CA SER A 1 35.216 83.725 138.725 1.00 0.00 C TER ENDMDL ATOM 1 N SER A 1 35.683 81.326 139.778 1.00... (11 Replies)
Discussion started by: bioinfo
11 Replies

9. Shell Programming and Scripting

Returning a value from awk to bash

Hi I am a newbie starting bash and I have a simple need to return the result of an operation from awk to bash. basically I want to use awk to tell me if "#" exists in a string, and then back in bash, i want to do an IF statement on this return in order to do other things. In my bash shell I... (2 Replies)
Discussion started by: oahmad
2 Replies

10. UNIX for Dummies Questions & Answers

New problem with awk using bash

Hi! I have a new problem with awk, this time I think is because I'm using it in bash and I don't know how to put the valor of the variable in awk. Here is the code: #!/bin/bash for i in 1 2 3 4 5 do a=$i b=$ awk '$1>=a&&$1<=b {print $1,$2,$3}'>asdf test... (3 Replies)
Discussion started by: florpi
3 Replies
ppmtopgm(1)						      General Commands Manual						       ppmtopgm(1)

NAME
ppmtopgm - convert a portable pixmap into a portable graymap SYNOPSIS
ppmtopgm [ppmfile] DESCRIPTION
Reads a portable pixmap as input. Produces a portable graymap as output. The output is a "black and white" rendering of the original image, as in a black and white photograph. The quantization formula used is .299 r + .587 g + .114 b. Note that although there is a pgmtoppm program, it is not necessary for simple conversions from pgm to ppm , because any ppm program can read pgm (and pbm ) files automatically. pgmtoppm is for colorizing a pgm file. Also, see ppmtorgb3 for a different way of converting color to gray. And ppmdist generates a grayscale image from a color image, but in a way that makes it easy to differentiate the original colors, not necessarily a way that looks like a black and white photograph. QUOTE
Cold-hearted orb that rules the night Removes the colors from our sight Red is gray, and yellow white But we decide which is right And which is a quantization error. SEE ALSO
pgmtoppm(1),ppmtorgb3(1),rgb3toppm(1),ppmdist(1),ppm(5),pgm(5) AUTHOR
Copyright (C) 1989 by Jef Poskanzer. 10 April 2000 ppmtopgm(1)
All times are GMT -4. The time now is 02:07 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy