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Top Forums Shell Programming and Scripting Help with awk replacing identical columns based on another file Post 302735767 by Homa on Monday 26th of November 2012 06:04:00 AM
Old 11-26-2012
Help with awk replacing identical columns based on another file

Hello,

I am using Awk in UBUNTU 12.04.

I have a file like following with three fields and 44706 rows.
F1 A A
F2 G G
F3 A T

I have another file like this:

AL_1 F1 A A
AL_2 F1 A T
AL_3 F1 A A
AL_1 F2 G G
AL_2 F2 G A
AL_3 F2 G G
BO_1 F1 A A
BO_2 F1 A T
BO_1 F2 G A
BO_2 F2 G G
CO_1 F1 A T
CO_2 F1 T T
CO_1 F2 G G
CO_2 F2 G A

( I didn't write for F3 anymore but it contains F3 as well)

This sounds a bit complex. What I want to have is like this:

F1 A T
F2 G A
F3 A T

Sorry as this sounds complex. So, what I want to do is to look in the second file for a "F1" whose 3rd and 4th fields are not the same (i.e. A T instead of A A) and replace it in the first file for "F1".

So, for F2, F3 and the rest.

Thank you very much for any help.
 

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COLOR.4TH(8)						    BSD System Manager's Manual 					      COLOR.4TH(8)

NAME
color.4th -- FreeBSD color-detection boot module DESCRIPTION
The file that goes by the name of color.4th is a set of commands designed to simplify color logic. The commands of color.4th by themselves are not enough for most uses. Please refer to the examples below for the most common situations, and to loader(8) for additional commands. Before using any of the commands provided in color.4th, it must be included through the command: include color.4th This line is present in /boot/loader.4th file, so it is not needed (and should not be re-issued) in a normal setup. The commands provided by it are: loader_color? Returns FALSE if the loader_color environment variable is set to ``NO'' (case-insensitive) or ``0''. Otherwise returns TRUE (unless booting serial). The environment variables that effect its behavior are: loader_color If set to ``NO'' (case-insensitive) or ``0'', causes loader_color? to return FALSE, indicating to many modules that color should not be used. FILES
/boot/loader The loader(8). /boot/color.4th color.4th itself. /boot/loader.rc loader(8) bootstrapping script. EXAMPLES
Standard i386 /boot/loader.rc: Use color where applicable: loader_color="YES" SEE ALSO
loader.conf(5), loader(8), loader.4th(8) HISTORY
The color.4th set of commands first appeared in FreeBSD 9.0. AUTHORS
The color.4th set of commands was written by Devin Teske <dteske@FreeBSD.org>. BSD
August 6, 2013 BSD
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