Hi guys,
Please guide me if you have a solution to this problem. I have tried paste -s but it's not giving the desired output.
I have a file with the following content-
A123 box1
B345 bat2
C431 my_id
A123 service
C431 box1
A123 my_id
I need two different outputs-
OUTPUT1
A123... (6 Replies)
Hi All,
I have working (Perl) code to combine 2 input files into a single output file using the join function that works to a point, but has the following limitations:
1. I am restrained to 2 input files only.
2. Only the "matched" fields are written out to the "matched" output file and... (1 Reply)
I have 100 data files labelled 250.1.txt through 250.100.txt. The second column of the data files partially match (there is about %90 overlap). Each data file has 4 columns.
I want the merge all these text files by the matching values in the second column. In the output, the first column should... (1 Reply)
Dear all
I have big file with two columns
A_AA960715 GO:0006952
A_AA960715 GO:0008152
A_AA960715 GO:0016491
A_AA960715 GO:0007165
A_AA960715 GO:0005618
A_AA960716 GO:0006952
A_AA960716 GO:0005618
A_AA960716... (15 Replies)
I have two files
1.txt
34, ABC, 7, 8, 0.9
35, CDE, 6.5, -2, 0.01
2.txt
34, ABC, 9, 6, -1.9
35, CDE, 8.5, -2.3, 5.01
So in both files common columns are 1 and 2
so final o/p should look like
34, ABC, 7, 8, 0.9, 9, 6, -1.9
35, CDE, 6.5, -2, 0.01, 8.5, -2.3, 5.01
I tried using... (3 Replies)
I have the following records from multiple files.
415 A G
415 A G
415 A T
415 A .
415 A .
421 G A
421 G A,C
421 G A
421 G A
421 G A,C
421 G .
427 A C
427 A ... (3 Replies)
Hi,
I have two files A (2190 rows) and file B (1100 rows). I want to merge the contents of two files based on common field, also I need the unmatched rows from file A
file A:
ABC
XYZ
PQR
file B:
>LMN|chr1:11000-12456:
>ABC|chr15:176578-187678:
>PQR|chr3:14567-15866:
output... (3 Replies)
Hi All,
I have 4 files in below format. I took them as an example.
File 1: Cut from position 1-4 then 6-7 then 8-14 then rest left and make them as columns in one new file. Inserting character H to the initial of all line like HCTOT.
CTOT 456787897 Low fever
CTOR 556712345 High fever... (2 Replies)
Hi all,
Say i have multiple files x1 x2 x3 x4, all with common header (date, time, year, age),,
How can I merge them to one singe file "X" in shell scripting
Thanks for your suggestions. (2 Replies)
Discussion started by: msarguru
2 Replies
LEARN ABOUT CENTOS
comm
COMM(1) User Commands COMM(1)NAME
comm - compare two sorted files line by line
SYNOPSIS
comm [OPTION]... FILE1 FILE2
DESCRIPTION
Compare sorted files FILE1 and FILE2 line by line.
With no options, produce three-column output. Column one contains lines unique to FILE1, column two contains lines unique to FILE2, and
column three contains lines common to both files.
-1 suppress column 1 (lines unique to FILE1)
-2 suppress column 2 (lines unique to FILE2)
-3 suppress column 3 (lines that appear in both files)
--check-order
check that the input is correctly sorted, even if all input lines are pairable
--nocheck-order
do not check that the input is correctly sorted
--output-delimiter=STR
separate columns with STR
--help display this help and exit
--version
output version information and exit
Note, comparisons honor the rules specified by 'LC_COLLATE'.
EXAMPLES
comm -12 file1 file2
Print only lines present in both file1 and file2.
comm -3 file1 file2
Print lines in file1 not in file2, and vice versa.
GNU coreutils online help: <http://www.gnu.org/software/coreutils/> Report comm translation bugs to <http://translationproject.org/team/>
AUTHOR
Written by Richard M. Stallman and David MacKenzie.
COPYRIGHT
Copyright (C) 2013 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law.
SEE ALSO join(1), uniq(1)
The full documentation for comm is maintained as a Texinfo manual. If the info and comm programs are properly installed at your site, the
command
info coreutils 'comm invocation'
should give you access to the complete manual.
GNU coreutils 8.22 June 2014 COMM(1)