I'm having problems since few days ago, and i'm not able to make it works with a simple awk+grep script (or other way to do this).
For example, i have a input file1.txt:
cat inputfile1.txt
218299910417
1172051195
1172070231
1172073514
1183135117
1183135118
1183135119
1281440202
... (3 Replies)
How do I grep/check the on-hand value on the second line of show_prod script below? In this case it's a "3".
So if it's > 0, then run_this, otherwise, quit.
> ./show_prod
Product Status Onhand Price
shoe OK 3 1.1 (6 Replies)
hey
i m kinda new to this so i will appreciate any help
, i have this list of values:
pwwn = 0x50012482009cd7a7 nwwn=0x50012482009cd7a6 port_id = 0x280200
pwwn = 0x5001248201bcd7a7 nwwn=0x5001248201bcd7a6 port_id = 0x280300
pwwn = 0x50012482009c51ad nwwn=0x50012482009c51ac port_id =... (4 Replies)
Hi buddies ! I need some help with one grep command :) I have this table:
1 Petras Pavardenis 1980 5
08 Linas Bajoriunas 1970 10
3 Saulius Matikaitis 1982 2
5 Mindaugas Stulgis 1990... (1 Reply)
Hi have a large spreadsheet which has 4 columns
APM00111803814 server_2 96085 Corp IT Desktop and Apps
APM00111803814 server_2 96085 Corp IT Desktop and Apps
APM00111803814 server_2 96034 Storage Mgmt Team
APM00111803814 server_2 96152 GWP... (6 Replies)
Trying to do a grep -v on a value in the 2nd column of text. So if the word apple appears in a line in the 2nd column, it would not show up when the file was cat. Seems like a simple enough operation but I just can't figure it out. Any help would be appreciated. Thanks in advance.
Are apples... (4 Replies)
I have file that looks like this,
DIP-17571N|refseq:NP_651151 DIP-17460N|refseq:NP_511165|uniprotkb:P45890 DIP-17571N|refseq:NP_651151
DIP-19241N|refseq:NP_524261 DIP-19241N|refseq:NP_524261 DIP-17151N|refseq:NP_524316|uniprotkb:O16797
DIP-19588N|refseq:NP_731165 ... (2 Replies)
hi
I have 2 file with more than 10 columns for both
1st file
apple,0,0,0......
orange,1,2,3.....
mango,2,4,5.....
2nd file
apple,2,3,4,5,6,7...
orange,2,3,4,5,6,8...
watermerlon,2,3,4,5,6,abc...
mango,5,6,7,4,6,def.... (1 Reply)
Discussion started by: tententen
1 Replies
LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1)NAME
fastx_quality_stats - FASTX Statistics
DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)
[-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is
STDOUT. [-N] = New output format (with more information per nucleotide/cycle).
The *OLD* output TEXT file will have the following fields (one row per column):
column = column number (1 to 36 for a 36-cycles read solexa file)
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count
of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo-
tides found in this column. max-count = max. number of bases (in all cycles)
The *NEW* output format:
cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N):
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
to get a better layout as well as an overview about connected FASTX tools.
fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)