match two key columns in two files and print output (awk) Post: 302705623

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

compare columns from seven files and print the output

Hi guys, I need some help to come out with a solution . I have seven such files but I am showing only three for convenience. filea a5 20 a8 16 fileb a3 42 a7 14 filec a5 23 a3 07 The output file shoud contain the data in table form showing first field of...

2. Shell Programming and Scripting

Match files based on either of the two columns awk

Dear Shell experts, I have 2 files with structure: File 1: ID and count head test_GI_count1.txt 1000094 2 10039307 1 10039641 1 10047177 11 10047359 1 1008555 2 10120302 1 10120672 13 10121776 1 10121865 32 And 2nd file: head Protein_gi_GeneID_symbol.txt protein_gi GeneID...

3. Shell Programming and Scripting

Match two columns from two files and print output

Hello, I have two files which are of the following format File 1 which has two columns Protein_ID Substitution NP_997239 T53R NP_060668 V267M NP_058515 P856A NP_001206 T55M NP_006601 D371Y ...

4. Shell Programming and Scripting

awk : Want to print columns of different input files in line wise

Hi, I want to print last column of 3 input files with awk. cat file1.txt file2.txt file3.txt file1.txt 1 ad 200 2 ss 300 file2.txt 1 mm 444 2 ee 555 file3.txt 1 kk 999 2 jj 555 My o/p should be :- 1 200 444 999 2 300 555 555

5. Shell Programming and Scripting

Compare columns of multiple files and print those unique string from File1 in an output file.

Hi, I have multiple files that each contain one column of strings: File1: 123abc 456def 789ghi File2: 123abc 456def 891jkl File3: 234mno 123abc 456def In total I have 25 of these type of file.

6. Shell Programming and Scripting

Join two files combining multiple columns and produce mix and match output

I would like to join two files when two columns in each file matches with each other and then produce an output when taking multiple columns. Like I have file A 1234,ABCD,23,JOHN,NJ,USA 2345,ABCD,24,SAM,NY,USA 5678,GHIJ,24,TOM,NY,USA 5678,WXYZ,27,MAT,NJ,USA and file B ...

7. UNIX for Dummies Questions & Answers

Match the columns between two files and output

Hi Help, I have two files namely a.txt and b.txt a.txt looks like a.txt 1 2 2 1 3 3 2 4 4 4 5 6 6 7 7 b.txt looks like, b.txt 1 2 1 1 3 2 2 4 3 3 4 4 4 5 5

8. Shell Programming and Scripting

awk to print fields that match using conditions and a default value for non-matching in two files

Trying to use awk to match the contents of each line in file1 with $5 in file2. Both files are tab-delimited and there may be a space or special character in the name being matched in file2, for example in file1 the name is BRCA1 but in file2 the name is BRCA 1 or in file1 name is BCR but in file2...

9. UNIX for Beginners Questions & Answers

Match Strings between two files, print portions of each file together when matched ([g]awk)

I have two files and desire to use the strings from $1 of file 1 (file1.txt) as search criteria to find matches in $2 of file 2 (file2.txt). If matches are found I want to output the entire line of file 2 (file2.txt) followed by fields $2-$11 of file 1 (file1.txt). I can find the matches, I cannot...

10. UNIX for Beginners Questions & Answers

Match Fields between two files, print portions of each file together when matched in ([g]awk)'

I've written an awk script to compare two fields in two different files and then print portions of each file on the same line when matched. It works reasonably well, but every now and again, I notice some errors and cannot seem to figure out what the issue may be and am turning to you for help. ...

LEARN ABOUT OPENSOLARIS

comm

comm(1) 							   User Commands							   comm(1)

NAME

       comm - select or reject lines common to two files

SYNOPSIS

       comm [-123] file1 file2

DESCRIPTION

       The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output:
       lines only in file1; lines only in file2; and lines in both files.

       If the input files were ordered according to the collating sequence of the current locale, the lines  written  will  be	in  the  collating
       sequence of the original lines. If not, the results are unspecified.

OPTIONS

       The following options are supported:

       -1    Suppresses the output column of lines unique to file1.

       -2    Suppresses the output column of lines unique to file2.

       -3    Suppresses the output column of lines duplicated in file1 and file2.

OPERANDS

       The following operands are supported:

       file1	A path name of the first file to be compared. If file1 is -, the standard input is used.

       file2	A path name of the second file to be compared. If file2 is -, the standard input is used.

USAGE

       See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2^31 bytes).

EXAMPLES

       Example 1 Printing a list of utilities specified by files

       If file1, file2, and file3 each contain a sorted list of utilities, the command

	 example% comm -23 file1 file2	| comm -23 - file3

       prints a list of utilities in file1 not specified by either of the other files. The entry:

	 example% comm -12 file1 file2 | comm -12 - file3

       prints a list of utilities specified by all three files. And the entry:

	 example% comm -12  file2 file3 | comm -23 -file1

       prints a list of utilities specified by both file2 and file3, but not specified in file1.

ENVIRONMENT VARIABLES

       See  environ(5)	for  descriptions  of  the  following  environment  variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE,
       LC_CTYPE, LC_MESSAGES, and NLSPATH.

EXIT STATUS

       The following exit values are returned:

       0     All input files were successfully output as specified.

       >0    An error occurred.

ATTRIBUTES

       See attributes(5) for descriptions of the following attributes:

       +-----------------------------+-----------------------------+
       |      ATTRIBUTE TYPE	     |	    ATTRIBUTE VALUE	   |
       +-----------------------------+-----------------------------+
       |Availability		     |SUNWesu			   |
       +-----------------------------+-----------------------------+
       |CSI			     |enabled			   |
       +-----------------------------+-----------------------------+
       |Interface Stability	     |Standard			   |
       +-----------------------------+-----------------------------+

SEE ALSO

       cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5)

SunOS 5.11							    3 Mar 2004								   comm(1)