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Top Forums UNIX for Dummies Questions & Answers Is there any $PATH default setting? Post 302699473 by yifangt on Tuesday 11th of September 2012 07:01:24 PM
Old 09-11-2012
Is there any $PATH default setting?

This is a very newbie's question:
I was trying to add a new version of the same command "blastn", but the old command always shows up first.
Code:
which blastn
/usr/local/bin/blastn

The two versions of the same command "blastn" are located in:
Code:
which -a blastn
/usr/local/bin/blastn
/home/yifangt/download-software/bin/blastn

What I want is the one in my home directory "/home/yifangt/download-software/bin" .
I had specified the second one in my .bashrc file (and .bash_profile)
Code:
export PATH=$PATH:/home/yifangt/download-software/bin

How can get rid of the "/usr/local/bin/blastn" without removing the whole directory?
I can't remove the blastn in "/usr/local/bin" because it is preferred by other people, and many other commands sit in that directory too.
I had thought the my local .bashrc will overwrite the old $PATH so that "/home/yifangt/blastn" should be the one I use. Did I miss anything?
Thanks a lot!
 

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SHTOOL-PATH.TMP(1)					      GNU Portable Shell Tool						SHTOOL-PATH.TMP(1)

NAME
shtool-path - GNU shtool command dealing with shell path variables SYNOPSIS
shtool path [-s|--suppress] [-r|--reverse] [-d|--dirname] [-b|--basename] [-m|--magic] [-p|--path path] str [str ...] DESCRIPTION
This command deals with shell $PATH variables. It can find a program through one or more filenames given by one or more str arguments. It prints the absolute filesystem path to the program displayed on "stdout" plus an exit code of 0 if it was really found. OPTIONS
The following command line options are available. -s, --suppress Supress output. Useful to only test whether a program exists with the help of the return code. -r, --reverse Transform a forward path to a subdirectory into a reverse path. -d, --dirname Output the directory name of str. -b, --basename Output the base name of str. -m, --magic Enable advanced magic search for ""perl"" and ""cpp"". -p, --path path Search in path. Default is to search in $PATH. EXAMPLE
# shell script awk=`shtool path -p "${PATH}:." gawk nawk awk` perl=`shtool path -m perl` cpp=`shtool path -m cpp` revpath=`shtool path -r path/to/subdir` HISTORY
The GNU shtool path command was originally written by Ralf S. Engelschall <rse@engelschall.com> in 1998 for Apache. It was later taken over into GNU shtool. SEE ALSO
shtool(1), which(1). 18-Jul-2008 shtool 2.0.8 SHTOOL-PATH.TMP(1)
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