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Full Discussion: PLINK help
Top Forums Shell Programming and Scripting PLINK help Post 302695519 by smitra on Monday 3rd of September 2012 05:09:45 AM
Old 09-03-2012
Hello,
I tried to use

Code:
 ./plink --noweb --fam myfile.fam --bim myfile.bim --make-bed --out myfile.bed

But still didn't work. Here is the error message below. Can anybody PLEASE HELP?

Many thanks in advance.

@----------------------------------------------------------@
| PLINK! | v1.07 | 10/Aug/2009 |
|----------------------------------------------------------|
| (C) 2009 Shaun Purcell, GNU General Public License, v2 |
|----------------------------------------------------------|
| For documentation, citation & bug-report instructions: |
| PLINK: Whole genome data analysis toolset |
@----------------------------------------------------------@

Skipping web check... [ --noweb ]
Writing this text to log file [ myfile.bed.log ]
Analysis started: Mon Sep 3 10:06:10 2012

Options in effect:
--noweb
--fam myfile.fam
--bim myfile.bim
--make-bed
--out myfile.bed

** For gPLINK compatibility, do not use '.' in --out **

ERROR: No file [ plink.bed ] exists.
 

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MSGUNTYPOT(1)						User Contributed Perl Documentation					     MSGUNTYPOT(1)

NAME
msguntypot - update PO files when a typo is fixed in POT file SYNOPSIS
msguntypot -o old_pot -n new_pot pofiles ... DESCRIPTION
When you fix a trivial error which surely doesn't affect translations (e.g. a typo) in a POT file, you should unfuzzy the corresponding msgstr in the translated PO files to avoid so extra work to the translators. This task is difficult and error prone when done manually, and this tool is there to help doing so correctly. You just need to provide the two versions of the POT file: before the edition and after as marked in the above synopsis, and it all becomes automatic. HOW TO USE IT
In short, when you discover a typo in one of your [english] message, do the following: - Regenerate your POT and PO files. make -C po/ update-po # for message program translations debconf-updatepo # for debconf translations po4a po4a.conf # for po4a based documentation translations or something else, depending on your project's building settings. You know how to make sure your POT an PO files are uptodate, don't you?? - Make a copy of your POT file. cp myfile.pot myfile.pot.orig - Make a copy of all your files. mkdir po_fridge; cp *.po po_fridge - Fix your typo. $EDITOR the_file_in_which_there_is_a_typo - Regenerate your POT and PO files. See above. At this point, the typo fix fuzzied all the translations, and this unfortunate change is the only one between the PO files of your main directory and the one from the fridge. Here is how to solve this. - Discard fuzzy translation, restore the ones from the fridge. cp po_fridge/*.po . - Manually merge the PO files with the new POT file, but taking the useless fuzzy into account. msguntypot -o myfile.pot.orig -n myfile.pot *.po - Cleanups. rm -rf myfile.pot.orig po_fridge You're done. The typo was eradicated from msgstr of both your POT and PO files, and the PO files were not fuzzyied in the process. Your translators love you already. SEE ALSO
Despite its name, this tool is not part of the gettext tool suite. It is instead part of po4a. More precisely, it's a random Perl script using the fine po4a modules. For more information about po4a, please see: po4a(7) AUTHORS
Martin Quinson (mquinson#debian,org) COPYRIGHT AND LICENSE
Copyright 2005 by SPI, inc. This program is free software; you may redistribute it and/or modify it under the terms of GPL (see the COPYING file). perl v5.14.2 2012-05-17 MSGUNTYPOT(1)
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