Sponsored Content
Top Forums Shell Programming and Scripting Search for a pattern,extract value(s) from next line, extract lines having those extracted value(s) Post 302676317 by Corona688 on Tuesday 24th of July 2012 11:55:10 AM
Old 07-24-2012
I wonder if this will work for you. Create this file:

Code:
# cyto.awk

BEGIN { FS=":" }

!MATCH {
        print "You must set the MATCH variable" >"/dev/stderr"
        exit 1
}

(!RGX) && ($0 ~ MATCH) && /COMPND/ {
        getline
        gsub(/[;, ]*/, "");
        RGX="[" $2 "]"
        FS=" ";
        print "RGX is "RGX >"/dev/stderr"
} RGX && ($5 ~ RGX) && /ATOM/

Use it like:

Code:
awk -f cyto.awk MATCH="CYTOCHROME C" inputfile1 inputfile2 ...

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

awk: need to extract a line before a pattern

Hello , I need your help to extract a line in a big file , and this line is always 11 lines before a specific pattern . Do you know a way via Awk ? Thanks in advance npn35 (17 Replies)
Discussion started by: npn35
17 Replies

2. Shell Programming and Scripting

Extract pattern from text line

Hi, the text line looks like this: "test1" " " "test2" "test3" "test4" "10" "test 10 12" "00:05:58" "filename.bin" "3.3MB" "/dir/name" "18459" what's the best way to select any of it? So I can for example get only the time or size and so on. I was trying awk -F""" '{print $N}' but... (3 Replies)
Discussion started by: TehOne
3 Replies

3. Shell Programming and Scripting

Extract pattern from text line

The text line has the following formats: what.ever.bla.bla.C01G06.BLA.BLA2 what.ever.bla.bla.C11G33.BLA.BLA2 what.ever.bla.bla.01x03.BLA.BLA2 what.ever.bla.bla.03x05.BLA.BLA2 what.ever.bla.bla.Part01.BLA.BLA2 and other similar ones, I need a way to select the "what.ever.bla.bla" part out... (4 Replies)
Discussion started by: TehOne
4 Replies

4. Shell Programming and Scripting

sed: Find start of pattern and extract text to end of line, including the pattern

This is my first post, please be nice. I have tried to google and read different tutorials. The task at hand is: Input file input.txt (example) abc123defhij-E-1234jslo 456ujs-W-abXjklp From this file the task is to grep the -E- and -W- strings that are unique and write a new file... (5 Replies)
Discussion started by: TestTomas
5 Replies

5. Shell Programming and Scripting

Extract two lines before and after the 'search text'

Hi Guys, I have a situation wherein I need to extract two lines from below the search string. Eg. Current: $ grep "$(date +'%a %b %e')" alert.log Mon Apr 12 03:58:10 2010 Mon Apr 12 12:51:48 2010 $ Here I would like the display to be something like Mon Apr 12... (6 Replies)
Discussion started by: geetap
6 Replies

6. Shell Programming and Scripting

extract specific line if the search pattern is found

Hi, I need to extract <APPNUMBER> tag alone, if the <college> haas IIT Chennai value. college tag value will have spaces embedded. Those spaces should not be suppresses. My Source file <Record><sno>1</sno><empid>E0001</empid><name>Rejsh suderam</name><college>IIT ... (3 Replies)
Discussion started by: Sekar1
3 Replies

7. Shell Programming and Scripting

Extract a pattern from multiple lines in a file

I have a file that has some lines starts with * I want to get these lines, then get the word between "diac" and "lex". ex. file: ;;WORD AlAx *0.942490 diac:Al>ax lex:>ax_1 bw:Al/DET+>ax/NOUN+ gloss:brother pos:noun prc3:0 prc2:0 prc1:0 prc0:Al_det per:na asp:na vox:na mod:na gen:m num:s... (4 Replies)
Discussion started by: Viernes
4 Replies

8. Shell Programming and Scripting

Extract lines that match a pattern

Hi all, I got a file that contains the following content, Actually it is a part of the file content, Installing XYZ XYZA Image, API 18, revision 2 Unzipping XYZ XYZA Image, API 18, revision 2 (1%) Unzipping XYZ XYZA Image, API 18, revision 2 (96%) Unzipping XYZ XYZA Image, API 18,... (7 Replies)
Discussion started by: Kashyap
7 Replies

9. UNIX for Dummies Questions & Answers

Extract fields before search pattern

Hi, I have below file structure and need to display hours, minutes and seconds as different fields. Incase hour or minute field is not there it should default to zero. *** Total elapsed time was 2 hours, 54 minutes and 40 seconds. *** Total elapsed time was 42 minutes and 36 seconds.... (7 Replies)
Discussion started by: fristyguy
7 Replies

10. UNIX for Beginners Questions & Answers

Extract some characters from lines based on pattern

Hi All, i would like to get some help regarding extracting certain characters from a line grepped. blahblah{1:F01IRVTUS30XXXX0000000001}{2:I103IRVTDEF0XXXXN}{4:blah blahblah{1:F01IRVTUS30XXXX0000000001}{2:I103IRVTDEF0XXXXN}{4:blah... (10 Replies)
Discussion started by: mad man
10 Replies
FC-MATCH(1)															       FC-MATCH(1)

NAME
fc-match - match available fonts SYNOPSIS
fc-match [ -svV? ] [ --sort ] [ --verbose ] [ --version ] [ --help ] [ font-pattern ] DESCRIPTION
fc-match matches font-pattern (empty pattern by default) using the normal fontconfig matching rules to find the best font available. If --sort is given, the sorted list of best matching fonts is displayed. With --verbose, the whole font pattern for each match is printed, otherwise only the file, family and style are printed.. OPTIONS
This program follows the usual GNU command line syntax, with long options starting with two dashes (`-'). A summary of options is included below. -v --verbose Print whole font pattern for each match. -? --help Show summary of options. -V --version Show version of the program and exit. -s --sort Displays sorted list of best matching fonts. font-pattern Displays fonts matching font-pattern (uses empty pattern by default). SEE ALSO
fc-list (1). The fontconfig user's guide, in HTML format: /usr/share/doc/packages/fontconfig/fontconfig-user.html. AUTHOR
This manual page was updated by Patrick Lam <plam@csail.mit.edu>. 16 October 2006 FC-MATCH(1)
All times are GMT -4. The time now is 04:16 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy