Sponsored Content
Top Forums UNIX for Dummies Questions & Answers How to use the join command to obtain tab delimited text files as an output? Post 302659233 by gull04 on Wednesday 20th of June 2012 03:10:35 PM
Old 06-20-2012
Hi,

Could you provide an example of input and expected output?

Regards

Dave
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Removing blanks in a text tab delimited file

Hi Experts I am very new to perl and need to make a script using perl. I would like to remove blanks in a text tab delimited file in in a specfic column range ( colum 21 to column 43) sample input and output shown below : Input: 117 102 650 652 654 656 117 93 95... (3 Replies)
Discussion started by: Faisal Riaz
3 Replies

2. Shell Programming and Scripting

Delete first column in tab-delimited text-file

I have a large text-file with tab-delimited genetic data that looks like: KSC112 KSC234 0 0 1 1 A G C T I simply wan to delete the first column, but since the file has 600 000 columns, it is not possible with awk (seems to be limited at 32k columns). Does anyone have an idea how to do this? (2 Replies)
Discussion started by: andmal
2 Replies

3. UNIX for Dummies Questions & Answers

How to convert text to columns in tab delimited text file

Hello Gurus, I have a text file containing nearly 12,000 tab delimited characters with 4000 rows. If the file size is small, excel can convert the text into coloumns. However, the file that I have is very big. Can some body help me in solving this problem? The input file example, ... (6 Replies)
Discussion started by: Unilearn
6 Replies

4. Shell Programming and Scripting

join files cisco command output

We have two files with results of two commands of cisco: one file; showintstatus, have the following format: Gi2/6 servidorlij connected 176 full 1000 10/100/1000BaseTsecond file; showmacaddrestable, have the following format: * 162 0021.9b8d.073e dynamic Yes 0 ... (1 Reply)
Discussion started by: robonet
1 Replies

5. UNIX for Dummies Questions & Answers

Deleting columns from a tab delimited text file?

I have a tab limited text file with 10000+ columns. I want to delete columns 6 through 23, how do I go about doing that? Thanks! (1 Reply)
Discussion started by: evelibertine
1 Replies

6. UNIX for Dummies Questions & Answers

Add a new column to a tab delimited text file

I want to add a new column to a tab delimited text file. It will be the first column and it will just be 1's. How do I go about doing that? Thanks! (1 Reply)
Discussion started by: evelibertine
1 Replies

7. UNIX for Dummies Questions & Answers

How to convert a text file into tab delimited format?

I have a text file that made using text editor in Ubuntu. However the text file is not being recognized as space or tab delimited, the formatting seems to be messed up. How can I convert the text file into tab delimited format? (3 Replies)
Discussion started by: evelibertine
3 Replies

8. Shell Programming and Scripting

Append output in tab delimited format

hello.. i m scripting in Perl and having issue writing the output in specific format..i read two files and run some commands and write output to one file. i want this to be a 2d table, File one has 48 rows and file two has 48 rows, first i take one id from file one, and go to second file, loop... (2 Replies)
Discussion started by: empyrean
2 Replies

9. UNIX for Dummies Questions & Answers

Need to convert a pipe delimited text file to tab delimited

Hi, I have a rquirement in unix as below . I have a text file with me seperated by | symbol and i need to generate a excel file through unix commands/script so that each value will go to each column. ex: Input Text file: 1|A|apple 2|B|bottle excel file to be generated as output as... (9 Replies)
Discussion started by: raja kakitapall
9 Replies

10. Shell Programming and Scripting

Output file with <Tab> or <Space> Delimited

Input file: xyz,pqrs.lmno,NA,NA,NA,NA,NA,NA,NA abcd,pqrs.xyz,NA,NA,NA,NA,NA,NA,NA Expected Output: xyz pqrs.lmno NA NA NA NA NA NA NA abcd pqrs.xyz NA NA NA NA NA NA NA Command Tried so far: awk -F"," 'BEGIN{OFS=" ";} {print}' $File_Path/File_Name.csv Issue:... (5 Replies)
Discussion started by: TechGyaann
5 Replies
CSV2MIPE(1)						User Contributed Perl Documentation					       CSV2MIPE(1)

NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files based on MIPE version v1.1 arguments: * tab-delimited file with PCR-level data * tab-delimited file with SNP-level data * tab-delimited file with assay-level data Columns in file with PCR-level data: pcr_id pcr_modified (might be multiple, divided by semi-colon ";") pcr_project (might be multiple, divided by semi-colon ";") pcr_researcher (might be multiple, divided by semi-colon ";") pcr_species source_type source_id design_seq primer1_oligo primer1_seq primer1_tm primer2_oligo primer2_seq primer2_tm design_remark (might be multiple, divided by semi-colon ";") use_seq use_revcomp use_remark (might be multiple, divided by semi-colon ";") pcr_remark (might be multiple, divided by semi-colon ";") Columns in file with SNP-level data: pcr_id snp_id snp_pos snp_amb snp_remark (might be multiple, divided by semi-colon ";") Columns in file with assay-level data: pcr_id snp_id assay_id assay_type assay_enzyme assay_oligo assay_specific assay_tail assay_strand assay_remark (might be multiple, divided by semi-colon ";") SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv> ADDITIONAL INFO
See http://mipe.sourceforge.net AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk) perl v5.14.2 2005-07-20 CSV2MIPE(1)
All times are GMT -4. The time now is 04:56 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy