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Special Forums UNIX and Linux Applications High Performance Computing How to check performance of your HPC cluster? Post 302643935 by otheus on Monday 21st of May 2012 04:02:26 AM
Old 05-21-2012
"Understanding" isn't so important. At the end of the results, there is a number labeled "GLOPS". It looks like this:
Code:
WR00L2C2        8192    16     1     1             327.60          1.119e+00

The first column expresses some of the options used in the options (HPL.dat) file. The next two columns express the size in dimensions. The last column -- the one you want -- is the number of Gigaflops measured for that run. It's in scientific notation, meaning:
Code:
1.119 x 10^(00)  = 1.119 GFlops

If the output were 3.42e-01, then you'd have:
Code:
3.42 x 10^(-01) = 0.342 GFlops = 342 MFlops

Do you understand now?

---------- Post updated at 10:02 AM ---------- Previous update was at 09:34 AM ----------

As to how to configure this to run on multiple nodes, you have to (1) configure HPL.dat to run on mxn processors, where m and n are close together; so if you have a cluster containing 12 cores, optimal is normally m=3 and n=4. That's not always the case, but it typically is. (2) You must configure your MPI environment so that it runs on that many processors. How you do #2 depends on your MPICH software and setup. If you have a batch system like PBS or SGE, that further complicates the matter, as you need to queue the job with that number of processors. Sometimes with queuing engines, you can't easily dictate which nodes the job will run on. So if you have 6 nodes each with 4 cores, it might not be possible to say "run this on 3 nodes using all cores on each one". (But normally it's possible to say "run it on 3 nodes using 1 core on each one".)
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cmdisklock(1m)															    cmdisklock(1m)

NAME
cmdisklock - manage Serviceguard cluster lock devices. SYNOPSIS
cmdisklock check path cmdisklock [-f] reset path DESCRIPTION
cmdisklock is a tool to check the current state of a Serviceguard cluster lock device. It can also be used to reset the state of the clus- ter lock device. The need to reset the cluster lock device state could arise if the cluster lock device is replaced or becomes corrupt. A cluster lock device can be either an HP-UX LVM cluster lock or a cluster lock LUN device. HP-UX LVM cluster locks exist only on a disk in an LVM volume group. Cluster lock LUNs exist only on disks dedicated to cluster lock. cmdisklock is useful for checking either type of cluster lock and for re-initializing cluster lock LUN devices after a failure or corruption. NOTE To restore an HP-UX LVM cluster lock, use vgcfgrestore. cmdisklock will fail until vgcfgrestore is run, and cmdisklock is unnecessary as long as vgcfgbackup was done after the cluster lock was initialized. See the Managing Serviceguard manual for details. The syntax of the path option depends on the type of lock. For HP-UX LVM cluster lock disks, the syntax is VG:PV (for example: /dev/vglock:/dev/dsk/c0t0d2). For cluster lock LUN disks, the path is the disk device path. For example, /dev/sdd1 (on Linux) or /dev/dsk/c0t1d2 (on HP-UX). Options cmdisklock supports the following options: check Check the current state of the cluster lock device and report the results. reset Reset (initialize) the state of the cluster lock device. This operation should only be performed on a cluster lock LUN device. For HP-UX LVM cluster lock, use vgcfgrestore as documented in the Managing Serviceguard manual. After performing a reset, a check can be used to verify that the lock is cleared. EXAMPLES
If the cluster lock LUN device becomes corrupted and the cluster is up, messages like the following will appear in syslog. Mar 15 12:20:41 usb cmdisklockd[17599]: WARNING: Cluster lock LUN /dev/dsk/c0t1d2 is corrupt: bad label. Until this situation is cor- rected, a single failure could cause all nodes in the cluster to crash. Mar 15 12:20:41 usb cmdisklockd[17599]: After ensuring that all active nodes in the cluster have logged this message, run 'cmdisklock reset /dev/dsk/c0t1d2' to repair Mar 15 12:20:41 usb cmdisklockd[17599]: Cluster lock disk /dev/dsk/c0t1d2 is inaccessible Once the above messages appear in syslog on all running nodes, the following command will re-initialize the cluster lock LUN: ucd:/> cmdisklock reset /dev/dsk/c0t1d2 WARNING: Cluster lock LUN /dev/dsk/c0t1d2 is corrupt: bad label. Until this situation is corrected, a single failure could cause all nodes in the cluster to crash. After ensuring that all active nodes in the cluster have logged this message, run 'cmdisklock reset /dev/dsk/c0t1d2' to repair /dev/dsk/c0t1d2 is inaccessible Resetting cluster lock device /dev/dsk/c0t1d2 Cluster lock reset completed /dev/dsk/c0t1d2 is accessible cleared After the lock is restored, a message like the following appears in syslog: Mar 15 12:23:11 usb cmdisklockd[17599]: Cluster lock disk /dev/dsk/c0t1d2 is accessible WARNINGS
CAUTION For cluster lock LUN, reset is a potentially destructive operation. While cmdisklock checks for known volume manager and file system use (overridden by -f), it does not validate that the device to be reset is actually used by any cluster. If -f is used on the wrong device file, loss of data may result. CAUTION Care should be taken when doing a reset when the cluster is active as there is a remote possibility that the cluster will partition right when this command is run and both nodes could end up thinking they have successfully acquired the lock. To avoid this situation, make sure cmcld has logged a message in syslog on all running nodes saying the device is inaccessble, before performing a reset. Note that it is safe to run cmdisklock when the cluster is down. RETURN VALUE
cmdisklock returns the following values: 0 Successful completion. 1 The disk is inaccessible or is not recognized as a cluster lock. AUTHOR
cmdisklock was developed by HP. SEE ALSO
cmapplyconf(1m), cmviewcl(1m), vgcfgbackup(1m), vgcfgrestore(1m) Requires Optional Serviceguard Software cmdisklock(1m)
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