@alfonsopilato. Hi, there is not such thing as an extension on Unix. So humans may call it that way, but for the system it is a file with a dot somewhere in the name (a dot at the beginning does have a special meaning of course as it designates a hidden file etc).
Last edited by Scrutinizer; 04-14-2012 at 06:28 PM..
This User Gave Thanks to Scrutinizer For This Post:
Hi,
I have a file with below values.
/uvxapps/etl/Ascential/DataStage/DSEngine/dsenv.orig
/uvxapps/etl/Ascential/DataStage/DSEngine/dsenv
/uvxapps/etl/Ascential/DataStage/DSEngine/sample/.cshrc
/uvxapps/etl/Ascential/DataStage/DSEngine/sample/.login... (3 Replies)
hey. i am a bit new to unix and i am trying to figure out how to list the names of the 'dot' files that are in my account.
what command does this?
thank you very much for your help. (4 Replies)
Hi,
I am creating a phonebook to store the name:phone:address.The phonebook is used to store, edit,delete and list the data. Now i need to use text file(dot files) for configuration (saving and loading selections). I really don't know how to do that. Please help
thanks.. (6 Replies)
Hi every one,
i have to dot pc files. One have main function but one dont have.I have to call dot pc file using system () cmd.File is being call have main function.Please let me know how i can call .pc file with two arguments from other dot pc file.I want some thing like
sprintf(buf,... (1 Reply)
Hi every one,
i have to dot pc files. One have main function but one dont have.I have to call dot pc file using system () cmd.File is being call have main function.Please let me know how i can call .pc file with two arguments from other dot pc file.I want some thing like sprintf(buf, "ss_xxx.pc... (4 Replies)
hi
I would like to ask if someone knows a command or a script on how to rename a multiple file in the directory starting at the end of the filename or at the .extension( i would like to remove the last 11 character before the extension) for example
Below is the result of my command ls inside... (5 Replies)
I need a script that will allow me to rename all of my files in subdir /FilesIn
as follows:
From kumc_835_111200.RMT.dat to kumc_835_111200RMT.dat
kumc_835_111200.KMR.dat to kumc_835_111200KMR.dat
.................etc
How do I do that whithout doing a sed ... (10 Replies)
Hi,
I tried to grep ".sh_history" (DOTsh_history) file and did not return anything though I found the word in .sh _history file through vi editor in Linux. Then I tried to grep ".profile" to check if it is the prob with hidden files and I got results.
Then I verified the same with my friend... (4 Replies)
Dear All,
How to remove. (dot) if found in the beginning of file name while doing wget (download)?
I am facing problem while re-sizing the image by using ImageMagick. Two dots in the file name are causing problem. ImageMagick is skipping such image with a dot . in the beginning, like
... (1 Reply)
After reading the manual of the command rename I would like to apply it to a folder with a couple of files containing old style dots before the file-type, e.g. up.to.the.roof.avi. So I'd like to rename them without the dots in between. Therefore I tried it the following way
rename -f -n ... (4 Replies)
Discussion started by: 1in10
4 Replies
LEARN ABOUT DEBIAN
bio::treeio::svggraph
Bio::TreeIO::svggraph(3pm) User Contributed Perl Documentation Bio::TreeIO::svggraph(3pm)NAME
Bio::TreeIO::svggraph - A simple output format that converts a Tree object to an SVG output
SYNOPSIS
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'svggraph');
while( my $tree = $in->next_tree ) {
my $svg_xml = $out->write_tree($tree);
}
DESCRIPTION
This outputs a tree as an SVG graphic using the SVG::Graph API
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Brian OConnor
Email brian.oconnor-at-excite.com
CONTRIBUTORS
Allen Day Guillaume Rousse, Guillaume-dot-Rousse-at-inria-dot-fr
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::TreeIO::svggraph->new();
Function: Builds a new Bio::TreeIO::svggraph object
Returns : Bio::TreeIO::svggraph
Args :-width => image width (default 1600)
-height => image height (default 1000)
-margin => margin (default 30)
-stroke => stroke color (default 'black')
-stroke_width=> stroke width (default 2)
-font_size=> font size (default '10px')
-nomalize => undef or 'log' (default is undef)
write_tree
Title : write_tree
Usage : $treeio->write_tree($tree);
Function: Write a tree out to data stream in newick/phylip format
Returns : none
Args : Bio::Tree::TreeI object
decorateRoot
Title : _decorateRoot
Usage : internal methods
Function:
Example :
Returns :
Args :
next_tree
Title : next_tree
Usage :
Function: Sorry not possible with this format
Returns : none
Args : none
perl v5.14.2 2012-03-02 Bio::TreeIO::svggraph(3pm)