Hi there.
Maybe you should use sed.
Try doing something like:
Is your columns delimited by tab or spaces?
In case of tabs, and, if you're using bash, just replace the U character mentioned aboved by Ctrl-V then the TAB key. This will let you get the TAB you need.
That's it. Hope it helps.
This User Gave Thanks to chapeupreto For This Post:
HI guys,
I have created a script to read 1 column in a csv file and then place it in text file.
However, when i checked out the text file, it is not in a column format...
Example:
CSV file contains
name,age
aa,11
bb,22
cc,33
After using awk to get first column
TXT file... (1 Reply)
i have several thousand files and in subdirs that are named
file.46634.txt
budget.75346.pdf
etc
i want to remove the number but retain the extension.
it is always a 5 digit.
thanks. (6 Replies)
Helle,
I want to create a .ksh script in order to realize the following :
I have a .txt file organized in a bloc of information, each bloc start with 000 as following:
000...
001...
003...
004...
000...
001...
003...
004...
.
.
My aim is to add a new... (6 Replies)
Could anyone very kindly help me a simple way to perform the - perhaps - very trivial task of writing the name of a file as first line of that file which is in txt format?
And would be possible to do this recursively for some thousands files in the XY directory?
And, again, add to the simple... (3 Replies)
How do you sort a text file that is made up of a single column? (sorting done in alphabetical order)
Example input:
MAP1S
ISYNA1
STAT6
Example output:
ISYNA1
MAP1S
STAT6
Double post (0 Replies)
I have multiple txt files which begin with the word "orders" in folder C:\source. I need to move the files to folder C:\dest and rename them to "process_<date>_<count>"
So for example , if there are 3 files ordersa.txt , ordersb.txt and ordersc.txt in C:\source , after running the script I want... (1 Reply)
I have multiple txt files which begin with the word "orders" in folder C:\source. I need to move the files to folder C:\dest and rename them to "process_<date>_<count>"
So for example , if there are 3 files ordersa.txt , ordersb.txt and ordersc.txt in C:\source , after running the script I want... (7 Replies)
so...
Lets assume I have a text file.
The text file contains multiple "#" symbols.
I want to replace all thos "#"s with a STRING using DOS/Batch
I want to add a certain TEXT to the end of each line.
How can I do this WITHOUT aid of sed, grep or anything linux related ? (1 Reply)
Hi Guys,
I have one Big txt file and i what to phrase specific part as below.
Input :-
Event
Event {
recordLength 160118,
recordType 411,
eventId 3102118,
INTERNAL_PER_RO_ME_TA {
EVVXX_TIMESTAMP_HOUR 16,
EVVXX_TIMESTAMP_MINUTE 15,
EVVXX_TIMESTAMP_SECOND 3,
... (6 Replies)
Hi dears
i use bash shell
i have INPUT.txt
like this
number of columns different in one
some row have 12 , some 11 columns
see last column
INPUT.txt
CodeGender Age Grade Dialect Session Sentence Start End Length Phonemic Phonetic
63 M 27 BS/BA TEHRANI 3 4 298320 310050... (2 Replies)
Discussion started by: alii
2 Replies
LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1)NAME
fastx_quality_stats - FASTX Statistics
DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)
[-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is
STDOUT. [-N] = New output format (with more information per nucleotide/cycle).
The *OLD* output TEXT file will have the following fields (one row per column):
column = column number (1 to 36 for a 36-cycles read solexa file)
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count
of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo-
tides found in this column. max-count = max. number of bases (in all cycles)
The *NEW* output format:
cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N):
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
to get a better layout as well as an overview about connected FASTX tools.
fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)